Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26015 and AZOBR_RS26020 are separated by 380 nucleotides AZOBR_RS26020 and AZOBR_RS26025 are separated by 22 nucleotides AZOBR_RS26025 and AZOBR_RS26030 are separated by 198 nucleotides
AZOBR_RS26015: AZOBR_RS26015 - hypothetical protein, at 888,176 to 888,523
_RS26015
AZOBR_RS26020: AZOBR_RS26020 - hypothetical protein, at 888,904 to 889,401
_RS26020
AZOBR_RS26025: AZOBR_RS26025 - alpha gluctosidase galactosidase, at 889,424 to 890,719
_RS26025
AZOBR_RS26030: AZOBR_RS26030 - beta-glucosidase, at 890,918 to 892,252
_RS26030
Position (kb) 889
890
891 Strain fitness (log2 ratio) -2
-1
0
1 at 888.465 kb on + strand, within AZOBR_RS26015 at 888.465 kb on + strand, within AZOBR_RS26015 at 888.466 kb on - strand, within AZOBR_RS26015 at 888.466 kb on - strand, within AZOBR_RS26015 at 888.490 kb on + strand at 888.529 kb on - strand at 888.529 kb on - strand at 888.596 kb on + strand at 888.596 kb on + strand at 888.596 kb on + strand at 888.597 kb on - strand at 888.597 kb on - strand at 888.637 kb on + strand at 888.637 kb on + strand at 888.638 kb on - strand at 888.638 kb on - strand at 888.696 kb on + strand at 888.696 kb on + strand at 888.751 kb on - strand at 888.777 kb on + strand at 888.777 kb on + strand at 888.778 kb on - strand at 888.784 kb on - strand at 888.805 kb on + strand at 888.944 kb on - strand at 889.425 kb on + strand at 889.425 kb on + strand at 889.426 kb on - strand at 889.426 kb on - strand at 889.443 kb on + strand at 889.444 kb on - strand at 889.444 kb on - strand at 889.723 kb on - strand, within AZOBR_RS26025 at 889.723 kb on - strand, within AZOBR_RS26025 at 889.938 kb on + strand, within AZOBR_RS26025 at 889.938 kb on + strand, within AZOBR_RS26025 at 889.939 kb on - strand, within AZOBR_RS26025 at 889.948 kb on + strand, within AZOBR_RS26025 at 889.948 kb on + strand, within AZOBR_RS26025 at 889.948 kb on + strand, within AZOBR_RS26025 at 889.948 kb on + strand, within AZOBR_RS26025 at 889.949 kb on - strand at 890.223 kb on + strand, within AZOBR_RS26025 at 890.223 kb on + strand, within AZOBR_RS26025 at 890.223 kb on + strand, within AZOBR_RS26025 at 890.644 kb on - strand at 890.788 kb on - strand at 890.812 kb on + strand at 890.826 kb on - strand at 890.828 kb on + strand at 890.893 kb on + strand at 890.894 kb on - strand at 890.973 kb on - strand at 891.086 kb on + strand, within AZOBR_RS26030 at 891.087 kb on - strand, within AZOBR_RS26030 at 891.087 kb on - strand, within AZOBR_RS26030 at 891.215 kb on + strand, within AZOBR_RS26030 at 891.216 kb on - strand, within AZOBR_RS26030 at 891.216 kb on - strand, within AZOBR_RS26030 at 891.216 kb on - strand, within AZOBR_RS26030 at 891.216 kb on - strand, within AZOBR_RS26030 at 891.216 kb on - strand, within AZOBR_RS26030 at 891.466 kb on + strand, within AZOBR_RS26030 at 891.702 kb on + strand, within AZOBR_RS26030 at 891.703 kb on - strand, within AZOBR_RS26030 at 891.703 kb on - strand, within AZOBR_RS26030
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 888,465 + AZOBR_RS26015 0.83 +0.3 888,465 + AZOBR_RS26015 0.83 +0.2 888,466 - AZOBR_RS26015 0.83 +0.9 888,466 - AZOBR_RS26015 0.83 -0.0 888,490 + -0.1 888,529 - -2.0 888,529 - +0.4 888,596 + +0.7 888,596 + +1.6 888,596 + +0.3 888,597 - -0.1 888,597 - +0.2 888,637 + +0.3 888,637 + +0.3 888,638 - -2.4 888,638 - -0.6 888,696 + -0.7 888,696 + +0.7 888,751 - -0.5 888,777 + -0.1 888,777 + +1.2 888,778 - +0.1 888,784 - +0.1 888,805 + +0.6 888,944 - -2.3 889,425 + +0.4 889,425 + -0.9 889,426 - +0.1 889,426 - +1.5 889,443 + +0.8 889,444 - -0.1 889,444 - -0.0 889,723 - AZOBR_RS26025 0.23 +0.3 889,723 - AZOBR_RS26025 0.23 +0.3 889,938 + AZOBR_RS26025 0.40 -0.2 889,938 + AZOBR_RS26025 0.40 -0.3 889,939 - AZOBR_RS26025 0.40 -0.7 889,948 + AZOBR_RS26025 0.40 +0.6 889,948 + AZOBR_RS26025 0.40 +0.1 889,948 + AZOBR_RS26025 0.40 -0.2 889,948 + AZOBR_RS26025 0.40 +1.4 889,949 - +0.8 890,223 + AZOBR_RS26025 0.62 -0.4 890,223 + AZOBR_RS26025 0.62 +0.5 890,223 + AZOBR_RS26025 0.62 +0.3 890,644 - -0.5 890,788 - -0.5 890,812 + -0.6 890,826 - -0.3 890,828 + -0.7 890,893 + -0.3 890,894 - -2.5 890,973 - +0.1 891,086 + AZOBR_RS26030 0.13 -0.1 891,087 - AZOBR_RS26030 0.13 -0.1 891,087 - AZOBR_RS26030 0.13 +0.5 891,215 + AZOBR_RS26030 0.22 -0.2 891,216 - AZOBR_RS26030 0.22 +0.6 891,216 - AZOBR_RS26030 0.22 +0.2 891,216 - AZOBR_RS26030 0.22 -0.3 891,216 - AZOBR_RS26030 0.22 +0.1 891,216 - AZOBR_RS26030 0.22 +0.1 891,466 + AZOBR_RS26030 0.41 -1.0 891,702 + AZOBR_RS26030 0.59 +0.1 891,703 - AZOBR_RS26030 0.59 +1.1 891,703 - AZOBR_RS26030 0.59 -0.6
Or see this region's nucleotide sequence