Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17110 and AZOBR_RS17115 overlap by 4 nucleotides AZOBR_RS17115 and AZOBR_RS17120 are separated by 250 nucleotides AZOBR_RS17120 and AZOBR_RS17125 are separated by 7 nucleotides AZOBR_RS17125 and AZOBR_RS17130 are separated by 44 nucleotides
AZOBR_RS17110: AZOBR_RS17110 - flavodoxin, at 594,778 to 595,260
_RS17110
AZOBR_RS17115: AZOBR_RS17115 - hypothetical protein, at 595,257 to 595,586
_RS17115
AZOBR_RS17120: AZOBR_RS17120 - hypothetical protein, at 595,837 to 596,127
_RS17120
AZOBR_RS17125: AZOBR_RS17125 - adenylylsulfate kinase, at 596,135 to 596,668
_RS17125
AZOBR_RS17130: AZOBR_RS17130 - ribonuclease, at 596,713 to 597,210
_RS17130
Position (kb) 596
597 Strain fitness (log2 ratio) -2
-1
0
1 at 595.139 kb on - strand, within AZOBR_RS17110 at 595.139 kb on - strand, within AZOBR_RS17110 at 595.312 kb on - strand, within AZOBR_RS17115 at 595.410 kb on + strand, within AZOBR_RS17115 at 595.555 kb on - strand at 595.808 kb on + strand at 595.814 kb on + strand at 595.814 kb on + strand at 595.814 kb on + strand at 595.814 kb on + strand at 595.815 kb on - strand at 595.815 kb on - strand at 595.815 kb on - strand at 595.942 kb on + strand, within AZOBR_RS17120 at 595.943 kb on - strand, within AZOBR_RS17120 at 595.943 kb on - strand, within AZOBR_RS17120 at 596.087 kb on - strand, within AZOBR_RS17120 at 596.259 kb on + strand, within AZOBR_RS17125 at 596.260 kb on - strand, within AZOBR_RS17125 at 596.474 kb on + strand, within AZOBR_RS17125 at 596.475 kb on - strand, within AZOBR_RS17125 at 596.475 kb on - strand, within AZOBR_RS17125 at 596.475 kb on - strand, within AZOBR_RS17125 at 596.475 kb on - strand, within AZOBR_RS17125 at 596.475 kb on - strand, within AZOBR_RS17125 at 596.480 kb on - strand, within AZOBR_RS17125 at 596.508 kb on + strand, within AZOBR_RS17125 at 596.509 kb on - strand, within AZOBR_RS17125 at 596.509 kb on - strand, within AZOBR_RS17125 at 596.509 kb on - strand, within AZOBR_RS17125 at 596.509 kb on - strand, within AZOBR_RS17125 at 597.179 kb on + strand at 597.179 kb on + strand at 597.180 kb on + strand at 597.180 kb on - strand at 597.231 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 595,139 - AZOBR_RS17110 0.75 -0.1 595,139 - AZOBR_RS17110 0.75 +0.9 595,312 - AZOBR_RS17115 0.17 -0.1 595,410 + AZOBR_RS17115 0.46 -1.8 595,555 - -1.0 595,808 + -1.2 595,814 + +0.1 595,814 + +0.8 595,814 + -0.1 595,814 + -0.0 595,815 - +0.2 595,815 - +0.4 595,815 - -0.3 595,942 + AZOBR_RS17120 0.36 +0.5 595,943 - AZOBR_RS17120 0.36 -0.1 595,943 - AZOBR_RS17120 0.36 -0.1 596,087 - AZOBR_RS17120 0.86 +0.5 596,259 + AZOBR_RS17125 0.23 -1.5 596,260 - AZOBR_RS17125 0.23 -0.5 596,474 + AZOBR_RS17125 0.63 -0.2 596,475 - AZOBR_RS17125 0.64 -1.0 596,475 - AZOBR_RS17125 0.64 -0.6 596,475 - AZOBR_RS17125 0.64 -0.7 596,475 - AZOBR_RS17125 0.64 +0.5 596,475 - AZOBR_RS17125 0.64 -0.6 596,480 - AZOBR_RS17125 0.65 +0.3 596,508 + AZOBR_RS17125 0.70 -0.7 596,509 - AZOBR_RS17125 0.70 -0.4 596,509 - AZOBR_RS17125 0.70 -0.2 596,509 - AZOBR_RS17125 0.70 -0.3 596,509 - AZOBR_RS17125 0.70 -0.2 597,179 + -1.2 597,179 + +0.3 597,180 + +1.0 597,180 - +0.5 597,231 + -0.3
Or see this region's nucleotide sequence