Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27540 and AO353_27545 are separated by 28 nucleotides AO353_27545 and AO353_27550 are separated by 91 nucleotides AO353_27550 and AO353_27555 are separated by 80 nucleotides AO353_27555 and AO353_27560 are separated by 222 nucleotides
AO353_27540: AO353_27540 - TetR family transcriptional regulator, at 6,009,763 to 6,010,410
_27540
AO353_27545: AO353_27545 - hypothetical protein, at 6,010,439 to 6,011,152
_27545
AO353_27550: AO353_27550 - hypothetical protein, at 6,011,244 to 6,011,444
_27550
AO353_27555: AO353_27555 - hypothetical protein, at 6,011,525 to 6,011,716
_27555
AO353_27560: AO353_27560 - GDP-mannose pyrophosphatase, at 6,011,939 to 6,012,532
_27560
Position (kb)
6011
6012 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6010.266 kb on - strand, within AO353_27540 at 6010.335 kb on + strand, within AO353_27540 at 6010.335 kb on + strand, within AO353_27540 at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.367 kb on + strand at 6010.368 kb on - strand at 6010.368 kb on - strand at 6010.368 kb on - strand at 6010.368 kb on - strand at 6010.368 kb on - strand at 6010.468 kb on + strand at 6010.516 kb on + strand, within AO353_27545 at 6010.516 kb on + strand, within AO353_27545 at 6010.544 kb on + strand, within AO353_27545 at 6010.544 kb on + strand, within AO353_27545 at 6010.544 kb on + strand, within AO353_27545 at 6010.544 kb on + strand, within AO353_27545 at 6010.544 kb on + strand, within AO353_27545 at 6010.545 kb on - strand, within AO353_27545 at 6010.545 kb on - strand, within AO353_27545 at 6010.545 kb on - strand, within AO353_27545 at 6010.545 kb on - strand, within AO353_27545 at 6010.545 kb on - strand, within AO353_27545 at 6010.741 kb on + strand, within AO353_27545 at 6010.760 kb on + strand, within AO353_27545 at 6010.760 kb on + strand, within AO353_27545 at 6010.760 kb on + strand, within AO353_27545 at 6010.760 kb on + strand, within AO353_27545 at 6010.761 kb on - strand, within AO353_27545 at 6010.787 kb on + strand, within AO353_27545 at 6010.787 kb on + strand, within AO353_27545 at 6010.787 kb on + strand, within AO353_27545 at 6010.787 kb on + strand, within AO353_27545 at 6010.788 kb on - strand, within AO353_27545 at 6010.788 kb on - strand, within AO353_27545 at 6010.788 kb on - strand, within AO353_27545 at 6010.788 kb on - strand, within AO353_27545 at 6010.819 kb on - strand, within AO353_27545 at 6010.924 kb on - strand, within AO353_27545 at 6010.924 kb on - strand, within AO353_27545 at 6010.924 kb on - strand, within AO353_27545 at 6011.182 kb on - strand at 6011.274 kb on + strand, within AO353_27550 at 6011.274 kb on + strand, within AO353_27550 at 6011.460 kb on + strand at 6011.460 kb on + strand at 6011.461 kb on - strand at 6011.533 kb on + strand at 6011.534 kb on - strand at 6011.583 kb on + strand, within AO353_27555 at 6011.636 kb on - strand, within AO353_27555 at 6011.716 kb on + strand at 6011.716 kb on + strand at 6011.716 kb on + strand at 6011.716 kb on + strand at 6011.716 kb on + strand at 6011.716 kb on + strand at 6011.717 kb on - strand at 6011.717 kb on - strand at 6011.717 kb on - strand at 6011.717 kb on - strand at 6011.717 kb on - strand at 6011.734 kb on + strand at 6011.735 kb on - strand at 6011.751 kb on + strand at 6011.751 kb on + strand at 6011.751 kb on + strand at 6011.751 kb on + strand at 6011.751 kb on + strand at 6011.752 kb on - strand at 6011.752 kb on - strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.756 kb on + strand at 6011.757 kb on - strand at 6011.757 kb on - strand at 6011.757 kb on - strand at 6011.757 kb on - strand at 6011.757 kb on - strand at 6011.757 kb on - strand at 6011.757 kb on - strand at 6011.768 kb on - strand at 6011.786 kb on + strand at 6011.786 kb on + strand at 6011.786 kb on + strand at 6011.786 kb on + strand at 6011.787 kb on - strand at 6011.787 kb on - strand at 6011.819 kb on + strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.820 kb on - strand at 6011.858 kb on + strand at 6011.858 kb on + strand at 6011.859 kb on - strand at 6011.860 kb on + strand at 6011.860 kb on + strand at 6011.860 kb on + strand at 6011.860 kb on + strand at 6011.860 kb on + strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.861 kb on - strand at 6011.941 kb on - strand at 6011.956 kb on + strand at 6012.018 kb on + strand, within AO353_27560 at 6012.018 kb on + strand, within AO353_27560 at 6012.019 kb on - strand, within AO353_27560 at 6012.019 kb on - strand, within AO353_27560 at 6012.120 kb on + strand, within AO353_27560 at 6012.120 kb on + strand, within AO353_27560 at 6012.120 kb on + strand, within AO353_27560 at 6012.120 kb on + strand, within AO353_27560 at 6012.121 kb on - strand, within AO353_27560 at 6012.121 kb on - strand at 6012.121 kb on - strand, within AO353_27560 at 6012.171 kb on + strand, within AO353_27560 at 6012.171 kb on + strand, within AO353_27560 at 6012.171 kb on + strand, within AO353_27560 at 6012.171 kb on + strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.172 kb on - strand, within AO353_27560 at 6012.191 kb on + strand, within AO353_27560 at 6012.191 kb on + strand, within AO353_27560 at 6012.191 kb on + strand, within AO353_27560 at 6012.191 kb on + strand, within AO353_27560 at 6012.191 kb on + strand, within AO353_27560 at 6012.192 kb on - strand, within AO353_27560 at 6012.192 kb on - strand, within AO353_27560 at 6012.341 kb on + strand, within AO353_27560 at 6012.341 kb on + strand, within AO353_27560 at 6012.342 kb on - strand, within AO353_27560 at 6012.342 kb on - strand, within AO353_27560 at 6012.399 kb on + strand, within AO353_27560
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 6,010,266 - AO353_27540 0.78 -0.0 6,010,335 + AO353_27540 0.88 -1.3 6,010,335 + AO353_27540 0.88 -0.2 6,010,367 + +1.3 6,010,367 + -0.3 6,010,367 + +0.4 6,010,367 + +0.3 6,010,367 + -0.1 6,010,367 + -1.4 6,010,367 + +0.1 6,010,367 + +0.9 6,010,367 + -0.8 6,010,367 + +2.3 6,010,367 + -2.3 6,010,368 - -0.1 6,010,368 - -1.0 6,010,368 - -1.7 6,010,368 - +0.9 6,010,368 - -0.0 6,010,468 + +0.6 6,010,516 + AO353_27545 0.11 +0.4 6,010,516 + AO353_27545 0.11 +0.3 6,010,544 + AO353_27545 0.15 +0.7 6,010,544 + AO353_27545 0.15 +1.5 6,010,544 + AO353_27545 0.15 -0.2 6,010,544 + AO353_27545 0.15 +0.3 6,010,544 + AO353_27545 0.15 -0.1 6,010,545 - AO353_27545 0.15 -0.5 6,010,545 - AO353_27545 0.15 -0.0 6,010,545 - AO353_27545 0.15 -2.0 6,010,545 - AO353_27545 0.15 +0.2 6,010,545 - AO353_27545 0.15 -0.7 6,010,741 + AO353_27545 0.42 +0.1 6,010,760 + AO353_27545 0.45 +0.3 6,010,760 + AO353_27545 0.45 -0.2 6,010,760 + AO353_27545 0.45 -0.0 6,010,760 + AO353_27545 0.45 +1.1 6,010,761 - AO353_27545 0.45 -0.3 6,010,787 + AO353_27545 0.49 -0.3 6,010,787 + AO353_27545 0.49 +1.3 6,010,787 + AO353_27545 0.49 +2.3 6,010,787 + AO353_27545 0.49 -1.3 6,010,788 - AO353_27545 0.49 -0.0 6,010,788 - AO353_27545 0.49 -1.0 6,010,788 - AO353_27545 0.49 -0.3 6,010,788 - AO353_27545 0.49 -0.3 6,010,819 - AO353_27545 0.53 +0.3 6,010,924 - AO353_27545 0.68 +0.6 6,010,924 - AO353_27545 0.68 -0.7 6,010,924 - AO353_27545 0.68 -0.7 6,011,182 - -1.0 6,011,274 + AO353_27550 0.15 -1.4 6,011,274 + AO353_27550 0.15 -1.3 6,011,460 + -0.5 6,011,460 + -0.7 6,011,461 - -1.3 6,011,533 + -0.7 6,011,534 - +0.7 6,011,583 + AO353_27555 0.30 -0.1 6,011,636 - AO353_27555 0.58 +0.4 6,011,716 + +1.8 6,011,716 + -0.1 6,011,716 + -1.8 6,011,716 + +0.4 6,011,716 + +1.0 6,011,716 + +2.3 6,011,717 - +0.3 6,011,717 - -1.3 6,011,717 - -1.7 6,011,717 - +0.8 6,011,717 - -0.5 6,011,734 + +2.3 6,011,735 - -2.4 6,011,751 + +0.7 6,011,751 + +0.5 6,011,751 + -1.7 6,011,751 + -0.7 6,011,751 + -0.8 6,011,752 - -0.7 6,011,752 - +0.7 6,011,756 + -0.3 6,011,756 + -0.0 6,011,756 + -2.4 6,011,756 + -1.2 6,011,756 + -1.0 6,011,756 + -0.0 6,011,756 + +0.7 6,011,756 + +0.3 6,011,756 + +0.7 6,011,756 + +2.1 6,011,757 - +0.3 6,011,757 - -0.3 6,011,757 - +0.2 6,011,757 - -0.7 6,011,757 - +0.0 6,011,757 - -0.3 6,011,757 - +0.2 6,011,768 - +0.7 6,011,786 + -0.1 6,011,786 + -0.7 6,011,786 + +1.0 6,011,786 + +0.5 6,011,787 - -0.2 6,011,787 - +0.0 6,011,819 + +0.3 6,011,820 - -0.7 6,011,820 - +0.7 6,011,820 - +1.3 6,011,820 - -0.4 6,011,820 - -1.3 6,011,820 - -0.1 6,011,820 - +0.3 6,011,820 - +0.1 6,011,858 + +0.9 6,011,858 + -1.0 6,011,859 - +0.7 6,011,860 + -0.2 6,011,860 + +0.6 6,011,860 + +1.3 6,011,860 + +1.1 6,011,860 + -0.5 6,011,861 - +1.9 6,011,861 - +0.8 6,011,861 - +0.1 6,011,861 - -0.0 6,011,861 - -0.4 6,011,861 - -0.1 6,011,861 - +0.1 6,011,861 - -0.3 6,011,941 - +0.9 6,011,956 + +0.1 6,012,018 + AO353_27560 0.13 -0.2 6,012,018 + AO353_27560 0.13 +0.5 6,012,019 - AO353_27560 0.13 +1.2 6,012,019 - AO353_27560 0.13 +0.8 6,012,120 + AO353_27560 0.30 -0.5 6,012,120 + AO353_27560 0.30 +1.3 6,012,120 + AO353_27560 0.30 +0.3 6,012,120 + AO353_27560 0.30 -0.6 6,012,121 - AO353_27560 0.31 -0.6 6,012,121 - +0.3 6,012,121 - AO353_27560 0.31 -0.1 6,012,171 + AO353_27560 0.39 -1.5 6,012,171 + AO353_27560 0.39 -0.5 6,012,171 + AO353_27560 0.39 -0.4 6,012,171 + AO353_27560 0.39 -0.9 6,012,172 - AO353_27560 0.39 +0.5 6,012,172 - AO353_27560 0.39 -0.1 6,012,172 - AO353_27560 0.39 -0.1 6,012,172 - AO353_27560 0.39 -0.1 6,012,172 - AO353_27560 0.39 +0.3 6,012,172 - AO353_27560 0.39 +0.8 6,012,172 - AO353_27560 0.39 +1.9 6,012,172 - AO353_27560 0.39 +0.1 6,012,172 - AO353_27560 0.39 -1.3 6,012,191 + AO353_27560 0.42 +1.7 6,012,191 + AO353_27560 0.42 -1.0 6,012,191 + AO353_27560 0.42 +0.4 6,012,191 + AO353_27560 0.42 -0.5 6,012,191 + AO353_27560 0.42 -0.7 6,012,192 - AO353_27560 0.43 +1.1 6,012,192 - AO353_27560 0.43 -1.3 6,012,341 + AO353_27560 0.68 -0.9 6,012,341 + AO353_27560 0.68 +0.7 6,012,342 - AO353_27560 0.68 +0.6 6,012,342 - AO353_27560 0.68 +1.6 6,012,399 + AO353_27560 0.77 -0.8
Or see this region's nucleotide sequence