Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23995 and AO353_24000 are separated by 26 nucleotides AO353_24000 and AO353_24005 are separated by 113 nucleotides
AO353_23995: AO353_23995 - 2,3-dihydroxybenzoate-AMP ligase, at 5,271,222 to 5,273,057
_23995
AO353_24000: AO353_24000 - isochorismate synthase, at 5,273,084 to 5,274,259
_24000
AO353_24005: AO353_24005 - peptide synthetase, at 5,274,373 to 5,278,725
_24005
Position (kb)
5273
5274
5275 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5272.395 kb on + strand, within AO353_23995 at 5272.395 kb on + strand, within AO353_23995 at 5272.395 kb on + strand, within AO353_23995 at 5272.395 kb on + strand, within AO353_23995 at 5272.396 kb on - strand, within AO353_23995 at 5272.396 kb on - strand, within AO353_23995 at 5272.396 kb on - strand, within AO353_23995 at 5272.396 kb on - strand, within AO353_23995 at 5272.420 kb on + strand, within AO353_23995 at 5272.420 kb on + strand, within AO353_23995 at 5272.420 kb on + strand, within AO353_23995 at 5272.420 kb on + strand, within AO353_23995 at 5272.420 kb on + strand, within AO353_23995 at 5272.421 kb on - strand, within AO353_23995 at 5272.421 kb on - strand, within AO353_23995 at 5272.421 kb on - strand, within AO353_23995 at 5272.421 kb on - strand, within AO353_23995 at 5272.639 kb on + strand, within AO353_23995 at 5272.639 kb on + strand, within AO353_23995 at 5272.640 kb on - strand, within AO353_23995 at 5272.640 kb on - strand, within AO353_23995 at 5272.640 kb on - strand, within AO353_23995 at 5272.640 kb on - strand, within AO353_23995 at 5272.640 kb on - strand, within AO353_23995 at 5272.708 kb on + strand, within AO353_23995 at 5272.739 kb on - strand, within AO353_23995 at 5272.739 kb on - strand, within AO353_23995 at 5272.739 kb on - strand, within AO353_23995 at 5272.739 kb on - strand, within AO353_23995 at 5272.792 kb on + strand, within AO353_23995 at 5272.792 kb on + strand, within AO353_23995 at 5272.792 kb on + strand, within AO353_23995 at 5272.793 kb on - strand, within AO353_23995 at 5272.805 kb on + strand, within AO353_23995 at 5272.805 kb on + strand, within AO353_23995 at 5272.806 kb on - strand, within AO353_23995 at 5272.900 kb on + strand at 5272.900 kb on + strand at 5272.900 kb on + strand at 5272.901 kb on - strand at 5272.901 kb on - strand at 5272.904 kb on + strand at 5272.904 kb on + strand at 5272.904 kb on + strand at 5272.904 kb on + strand at 5272.905 kb on - strand at 5273.049 kb on + strand at 5273.049 kb on + strand at 5273.049 kb on + strand at 5273.049 kb on + strand at 5273.049 kb on + strand at 5273.049 kb on + strand at 5273.049 kb on + strand at 5273.050 kb on - strand at 5273.050 kb on - strand at 5273.050 kb on - strand at 5273.051 kb on + strand at 5273.051 kb on + strand at 5273.083 kb on - strand at 5273.083 kb on - strand at 5273.083 kb on - strand at 5273.085 kb on + strand at 5273.085 kb on + strand at 5273.086 kb on - strand at 5273.713 kb on + strand, within AO353_24000 at 5273.713 kb on + strand, within AO353_24000 at 5273.713 kb on + strand, within AO353_24000 at 5273.713 kb on + strand, within AO353_24000 at 5273.714 kb on - strand, within AO353_24000 at 5273.717 kb on + strand at 5273.717 kb on + strand, within AO353_24000 at 5273.758 kb on + strand, within AO353_24000 at 5273.758 kb on + strand, within AO353_24000 at 5273.898 kb on - strand, within AO353_24000 at 5273.946 kb on - strand, within AO353_24000 at 5273.946 kb on - strand, within AO353_24000 at 5273.988 kb on + strand, within AO353_24000 at 5273.988 kb on + strand, within AO353_24000 at 5273.989 kb on - strand, within AO353_24000 at 5273.989 kb on - strand, within AO353_24000 at 5273.989 kb on - strand, within AO353_24000 at 5273.989 kb on - strand, within AO353_24000 at 5274.103 kb on + strand, within AO353_24000 at 5274.164 kb on + strand at 5274.164 kb on + strand at 5274.165 kb on - strand at 5274.165 kb on - strand at 5274.211 kb on + strand at 5274.211 kb on + strand at 5274.211 kb on + strand at 5274.212 kb on - strand at 5274.243 kb on - strand at 5274.383 kb on + strand at 5274.383 kb on + strand at 5274.383 kb on + strand at 5274.383 kb on + strand at 5274.383 kb on + strand at 5274.383 kb on + strand at 5274.384 kb on - strand at 5274.384 kb on - strand at 5274.435 kb on - strand at 5274.457 kb on + strand at 5274.457 kb on + strand at 5274.457 kb on + strand at 5274.458 kb on - strand at 5274.617 kb on + strand at 5274.617 kb on + strand at 5274.617 kb on + strand at 5274.617 kb on + strand at 5274.617 kb on + strand at 5274.617 kb on + strand at 5274.618 kb on - strand at 5274.641 kb on + strand at 5274.642 kb on - strand at 5274.829 kb on + strand, within AO353_24005 at 5274.829 kb on + strand, within AO353_24005 at 5274.830 kb on - strand, within AO353_24005 at 5274.830 kb on - strand, within AO353_24005 at 5275.127 kb on + strand, within AO353_24005 at 5275.128 kb on - strand, within AO353_24005
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 5,272,395 + AO353_23995 0.64 -1.8 5,272,395 + AO353_23995 0.64 -0.2 5,272,395 + AO353_23995 0.64 +0.8 5,272,395 + AO353_23995 0.64 -0.8 5,272,396 - AO353_23995 0.64 -0.1 5,272,396 - AO353_23995 0.64 +0.2 5,272,396 - AO353_23995 0.64 +0.9 5,272,396 - AO353_23995 0.64 +0.9 5,272,420 + AO353_23995 0.65 +1.7 5,272,420 + AO353_23995 0.65 -0.2 5,272,420 + AO353_23995 0.65 -0.0 5,272,420 + AO353_23995 0.65 +0.5 5,272,420 + AO353_23995 0.65 -1.5 5,272,421 - AO353_23995 0.65 +1.2 5,272,421 - AO353_23995 0.65 +1.8 5,272,421 - AO353_23995 0.65 +0.9 5,272,421 - AO353_23995 0.65 -0.8 5,272,639 + AO353_23995 0.77 -1.4 5,272,639 + AO353_23995 0.77 +0.1 5,272,640 - AO353_23995 0.77 +0.5 5,272,640 - AO353_23995 0.77 +0.2 5,272,640 - AO353_23995 0.77 -0.8 5,272,640 - AO353_23995 0.77 -0.9 5,272,640 - AO353_23995 0.77 +0.2 5,272,708 + AO353_23995 0.81 -0.4 5,272,739 - AO353_23995 0.83 -0.7 5,272,739 - AO353_23995 0.83 -0.1 5,272,739 - AO353_23995 0.83 +0.3 5,272,739 - AO353_23995 0.83 +0.2 5,272,792 + AO353_23995 0.86 -0.8 5,272,792 + AO353_23995 0.86 -1.2 5,272,792 + AO353_23995 0.86 +0.7 5,272,793 - AO353_23995 0.86 -0.4 5,272,805 + AO353_23995 0.86 +0.8 5,272,805 + AO353_23995 0.86 -0.8 5,272,806 - AO353_23995 0.86 +2.5 5,272,900 + +0.5 5,272,900 + +1.5 5,272,900 + +1.8 5,272,901 - +0.8 5,272,901 - +1.7 5,272,904 + +1.2 5,272,904 + +0.2 5,272,904 + -0.7 5,272,904 + -0.5 5,272,905 - +0.6 5,273,049 + -1.2 5,273,049 + -0.4 5,273,049 + +0.2 5,273,049 + -0.6 5,273,049 + -1.3 5,273,049 + -0.4 5,273,049 + -0.2 5,273,050 - +1.4 5,273,050 - -0.8 5,273,050 - -2.7 5,273,051 + +0.5 5,273,051 + -2.3 5,273,083 - +0.2 5,273,083 - -2.3 5,273,083 - +0.3 5,273,085 + -0.0 5,273,085 + +0.0 5,273,086 - -0.1 5,273,713 + AO353_24000 0.53 -0.6 5,273,713 + AO353_24000 0.53 +0.5 5,273,713 + AO353_24000 0.53 +0.5 5,273,713 + AO353_24000 0.53 +1.2 5,273,714 - AO353_24000 0.54 +1.2 5,273,717 + +0.2 5,273,717 + AO353_24000 0.54 -0.8 5,273,758 + AO353_24000 0.57 +0.6 5,273,758 + AO353_24000 0.57 +0.9 5,273,898 - AO353_24000 0.69 +1.0 5,273,946 - AO353_24000 0.73 +0.7 5,273,946 - AO353_24000 0.73 +1.6 5,273,988 + AO353_24000 0.77 +1.2 5,273,988 + AO353_24000 0.77 -0.4 5,273,989 - AO353_24000 0.77 +0.4 5,273,989 - AO353_24000 0.77 +0.0 5,273,989 - AO353_24000 0.77 -0.8 5,273,989 - AO353_24000 0.77 +1.2 5,274,103 + AO353_24000 0.87 +1.0 5,274,164 + -2.2 5,274,164 + -0.8 5,274,165 - -1.3 5,274,165 - +0.8 5,274,211 + +0.2 5,274,211 + -1.0 5,274,211 + -0.2 5,274,212 - +1.0 5,274,243 - -1.6 5,274,383 + -0.0 5,274,383 + +0.2 5,274,383 + -0.6 5,274,383 + +2.4 5,274,383 + -0.6 5,274,383 + +0.1 5,274,384 - -0.4 5,274,384 - -1.7 5,274,435 - +0.2 5,274,457 + -1.5 5,274,457 + +0.2 5,274,457 + +0.7 5,274,458 - -0.0 5,274,617 + +0.9 5,274,617 + +0.7 5,274,617 + -0.4 5,274,617 + -0.4 5,274,617 + +0.2 5,274,617 + -1.0 5,274,618 - -0.4 5,274,641 + -1.1 5,274,642 - -0.1 5,274,829 + AO353_24005 0.10 -0.4 5,274,829 + AO353_24005 0.10 +1.2 5,274,830 - AO353_24005 0.10 -0.9 5,274,830 - AO353_24005 0.10 -0.1 5,275,127 + AO353_24005 0.17 -0.4 5,275,128 - AO353_24005 0.17 -0.1
Or see this region's nucleotide sequence