Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23650 and AO353_23655 are separated by 158 nucleotides AO353_23655 and AO353_23660 are separated by 452 nucleotides AO353_23660 and AO353_23665 overlap by 4 nucleotides AO353_23665 and AO353_23670 are separated by 4 nucleotides AO353_23670 and AO353_23675 overlap by 4 nucleotides
AO353_23650: AO353_23650 - 3-carboxymuconate cyclase, at 5,179,299 to 5,180,474
_23650
AO353_23655: AO353_23655 - hypothetical protein, at 5,180,633 to 5,180,812
_23655
AO353_23660: AO353_23660 - hypothetical protein, at 5,181,265 to 5,181,474
_23660
AO353_23665: AO353_23665 - hypothetical protein, at 5,181,471 to 5,181,728
_23665
AO353_23670: AO353_23670 - glutathione S-transferase, at 5,181,733 to 5,182,344
_23670
AO353_23675: AO353_23675 - chromosome segregation protein SMC, at 5,182,341 to 5,185,982
_23675
Position (kb)
5181
5182 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5180.473 kb on - strand at 5180.510 kb on + strand at 5180.510 kb on + strand at 5180.510 kb on + strand at 5180.510 kb on + strand at 5180.511 kb on - strand at 5180.511 kb on - strand at 5180.511 kb on - strand at 5180.513 kb on + strand at 5180.514 kb on - strand at 5180.514 kb on - strand at 5180.572 kb on + strand at 5180.573 kb on - strand at 5180.573 kb on - strand at 5180.573 kb on - strand at 5180.573 kb on - strand at 5180.573 kb on - strand at 5180.617 kb on + strand at 5180.618 kb on - strand at 5180.618 kb on - strand at 5180.618 kb on - strand at 5180.744 kb on + strand, within AO353_23655 at 5180.744 kb on + strand, within AO353_23655 at 5180.745 kb on - strand, within AO353_23655 at 5180.745 kb on - strand, within AO353_23655 at 5180.745 kb on - strand at 5180.745 kb on - strand, within AO353_23655 at 5180.745 kb on - strand, within AO353_23655 at 5180.745 kb on - strand, within AO353_23655 at 5180.745 kb on - strand, within AO353_23655 at 5180.756 kb on + strand, within AO353_23655 at 5180.756 kb on + strand, within AO353_23655 at 5180.756 kb on + strand, within AO353_23655 at 5180.757 kb on - strand, within AO353_23655 at 5180.757 kb on - strand, within AO353_23655 at 5180.780 kb on + strand, within AO353_23655 at 5180.780 kb on + strand, within AO353_23655 at 5180.780 kb on + strand, within AO353_23655 at 5180.781 kb on - strand, within AO353_23655 at 5180.781 kb on - strand, within AO353_23655 at 5180.781 kb on - strand, within AO353_23655 at 5180.781 kb on - strand, within AO353_23655 at 5180.781 kb on - strand, within AO353_23655 at 5180.833 kb on + strand at 5180.833 kb on + strand at 5180.833 kb on + strand at 5180.833 kb on + strand at 5180.833 kb on + strand at 5180.833 kb on + strand at 5180.834 kb on - strand at 5180.834 kb on - strand at 5180.907 kb on + strand at 5180.944 kb on + strand at 5180.944 kb on + strand at 5180.944 kb on + strand at 5180.945 kb on - strand at 5180.945 kb on - strand at 5180.945 kb on - strand at 5180.945 kb on - strand at 5180.945 kb on - strand at 5180.954 kb on - strand at 5181.182 kb on - strand at 5181.185 kb on + strand at 5181.185 kb on + strand at 5181.185 kb on + strand at 5181.185 kb on + strand at 5181.185 kb on + strand at 5181.185 kb on + strand at 5181.185 kb on + strand at 5181.186 kb on - strand at 5181.186 kb on - strand at 5181.186 kb on - strand at 5181.186 kb on - strand at 5181.186 kb on - strand at 5181.188 kb on + strand at 5181.188 kb on + strand at 5181.189 kb on - strand at 5181.194 kb on + strand at 5181.194 kb on + strand at 5181.195 kb on - strand at 5181.195 kb on - strand at 5181.195 kb on - strand at 5181.304 kb on + strand, within AO353_23660 at 5181.305 kb on - strand, within AO353_23660 at 5181.305 kb on - strand, within AO353_23660 at 5181.321 kb on - strand, within AO353_23660 at 5181.321 kb on - strand, within AO353_23660 at 5181.322 kb on + strand, within AO353_23660 at 5181.322 kb on + strand, within AO353_23660 at 5181.322 kb on + strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.323 kb on - strand, within AO353_23660 at 5181.642 kb on - strand, within AO353_23665 at 5181.726 kb on + strand at 5181.727 kb on - strand at 5181.859 kb on + strand, within AO353_23670 at 5181.860 kb on - strand, within AO353_23670 at 5181.860 kb on - strand, within AO353_23670 at 5181.911 kb on + strand, within AO353_23670 at 5181.912 kb on - strand, within AO353_23670 at 5181.912 kb on - strand, within AO353_23670 at 5182.007 kb on + strand, within AO353_23670 at 5182.007 kb on + strand, within AO353_23670 at 5182.008 kb on - strand, within AO353_23670 at 5182.008 kb on - strand, within AO353_23670 at 5182.422 kb on + strand at 5182.422 kb on + strand at 5182.422 kb on + strand at 5182.422 kb on + strand at 5182.423 kb on - strand at 5182.423 kb on - strand at 5182.423 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 5,180,473 - +1.6 5,180,510 + -0.7 5,180,510 + -0.4 5,180,510 + -0.6 5,180,510 + -1.6 5,180,511 - -0.6 5,180,511 - -0.9 5,180,511 - +0.7 5,180,513 + +0.2 5,180,514 - +1.2 5,180,514 - -0.1 5,180,572 + -0.3 5,180,573 - -1.4 5,180,573 - -1.0 5,180,573 - -0.2 5,180,573 - -0.8 5,180,573 - +0.0 5,180,617 + +1.2 5,180,618 - +1.0 5,180,618 - -0.1 5,180,618 - -0.8 5,180,744 + AO353_23655 0.62 +0.7 5,180,744 + AO353_23655 0.62 -0.3 5,180,745 - AO353_23655 0.62 -1.4 5,180,745 - AO353_23655 0.62 +1.8 5,180,745 - +1.2 5,180,745 - AO353_23655 0.62 +0.0 5,180,745 - AO353_23655 0.62 -0.8 5,180,745 - AO353_23655 0.62 -0.1 5,180,745 - AO353_23655 0.62 -1.4 5,180,756 + AO353_23655 0.68 -0.1 5,180,756 + AO353_23655 0.68 +0.8 5,180,756 + AO353_23655 0.68 -2.0 5,180,757 - AO353_23655 0.69 -0.0 5,180,757 - AO353_23655 0.69 -0.4 5,180,780 + AO353_23655 0.82 +1.2 5,180,780 + AO353_23655 0.82 -0.6 5,180,780 + AO353_23655 0.82 -0.2 5,180,781 - AO353_23655 0.82 +1.8 5,180,781 - AO353_23655 0.82 -0.7 5,180,781 - AO353_23655 0.82 +0.5 5,180,781 - AO353_23655 0.82 +0.3 5,180,781 - AO353_23655 0.82 +1.2 5,180,833 + -0.6 5,180,833 + +1.5 5,180,833 + -0.0 5,180,833 + -0.5 5,180,833 + -0.6 5,180,833 + -0.2 5,180,834 - +0.2 5,180,834 - -0.2 5,180,907 + +1.2 5,180,944 + +0.2 5,180,944 + +0.4 5,180,944 + -0.1 5,180,945 - +0.7 5,180,945 - -1.6 5,180,945 - +1.2 5,180,945 - +1.2 5,180,945 - -1.3 5,180,954 - -1.6 5,181,182 - -0.8 5,181,185 + +0.3 5,181,185 + -1.4 5,181,185 + -1.1 5,181,185 + -0.4 5,181,185 + +0.7 5,181,185 + +0.4 5,181,185 + +0.4 5,181,186 - +1.0 5,181,186 - +0.7 5,181,186 - -1.2 5,181,186 - +0.4 5,181,186 - +1.2 5,181,188 + +0.5 5,181,188 + -1.6 5,181,189 - -0.7 5,181,194 + -1.1 5,181,194 + +2.2 5,181,195 - +0.5 5,181,195 - +1.2 5,181,195 - +1.6 5,181,304 + AO353_23660 0.19 +0.8 5,181,305 - AO353_23660 0.19 +1.1 5,181,305 - AO353_23660 0.19 -1.3 5,181,321 - AO353_23660 0.27 +0.4 5,181,321 - AO353_23660 0.27 +0.5 5,181,322 + AO353_23660 0.27 -0.9 5,181,322 + AO353_23660 0.27 +0.5 5,181,322 + AO353_23660 0.27 +1.2 5,181,323 - AO353_23660 0.28 -0.1 5,181,323 - AO353_23660 0.28 +0.9 5,181,323 - AO353_23660 0.28 +0.6 5,181,323 - AO353_23660 0.28 +1.2 5,181,323 - AO353_23660 0.28 -0.4 5,181,323 - AO353_23660 0.28 +0.2 5,181,323 - AO353_23660 0.28 +0.8 5,181,642 - AO353_23665 0.66 -1.1 5,181,726 + -0.9 5,181,727 - -0.4 5,181,859 + AO353_23670 0.21 -0.1 5,181,860 - AO353_23670 0.21 -0.6 5,181,860 - AO353_23670 0.21 -0.5 5,181,911 + AO353_23670 0.29 +0.3 5,181,912 - AO353_23670 0.29 +1.6 5,181,912 - AO353_23670 0.29 +0.5 5,182,007 + AO353_23670 0.45 +1.2 5,182,007 + AO353_23670 0.45 -1.4 5,182,008 - AO353_23670 0.45 +0.1 5,182,008 - AO353_23670 0.45 +0.2 5,182,422 + -0.4 5,182,422 + -0.1 5,182,422 + -2.1 5,182,422 + -0.6 5,182,423 - -1.1 5,182,423 - +0.8 5,182,423 - +0.0
Or see this region's nucleotide sequence