Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22245 and AO353_22250 are separated by 326 nucleotides AO353_22250 and AO353_22255 are separated by 43 nucleotides AO353_22255 and AO353_22260 are separated by 33 nucleotides AO353_22260 and AO353_22265 are separated by 226 nucleotides
AO353_22245: AO353_22245 - transcriptional regulator, at 4,870,888 to 4,873,683
_22245
AO353_22250: AO353_22250 - NADPH-dependent FMN reductase, at 4,874,010 to 4,874,585
_22250
AO353_22255: AO353_22255 - chloroperoxidase, at 4,874,629 to 4,875,453
_22255
AO353_22260: AO353_22260 - AraC family transcriptional regulator, at 4,875,487 to 4,875,951
_22260
AO353_22265: AO353_22265 - LysR family transcriptional regulator, at 4,876,178 to 4,877,101
_22265
Position (kb)
4874
4875
4876 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4873.709 kb on + strand at 4873.709 kb on + strand at 4873.710 kb on - strand at 4873.710 kb on - strand at 4873.792 kb on + strand at 4873.792 kb on + strand at 4873.792 kb on + strand at 4873.793 kb on - strand at 4873.793 kb on - strand at 4873.793 kb on - strand at 4873.827 kb on - strand at 4873.831 kb on - strand at 4873.889 kb on - strand at 4873.899 kb on - strand at 4873.899 kb on - strand at 4873.931 kb on + strand at 4873.931 kb on + strand at 4873.936 kb on + strand at 4874.031 kb on + strand at 4874.031 kb on + strand at 4874.031 kb on + strand at 4874.032 kb on - strand at 4874.032 kb on - strand at 4874.052 kb on - strand at 4874.105 kb on + strand, within AO353_22250 at 4874.106 kb on - strand, within AO353_22250 at 4874.106 kb on - strand, within AO353_22250 at 4874.193 kb on + strand, within AO353_22250 at 4874.193 kb on + strand, within AO353_22250 at 4874.194 kb on - strand, within AO353_22250 at 4874.194 kb on - strand, within AO353_22250 at 4874.194 kb on - strand at 4874.194 kb on - strand, within AO353_22250 at 4874.194 kb on - strand, within AO353_22250 at 4874.237 kb on + strand, within AO353_22250 at 4874.250 kb on + strand, within AO353_22250 at 4874.250 kb on + strand, within AO353_22250 at 4874.251 kb on - strand, within AO353_22250 at 4874.251 kb on - strand, within AO353_22250 at 4874.610 kb on + strand at 4874.611 kb on - strand at 4874.614 kb on + strand at 4874.614 kb on + strand at 4874.615 kb on - strand at 4874.640 kb on + strand at 4874.640 kb on + strand at 4874.640 kb on + strand at 4874.640 kb on + strand at 4874.640 kb on + strand at 4874.641 kb on - strand at 4874.641 kb on - strand at 4874.641 kb on - strand at 4874.641 kb on - strand at 4874.666 kb on - strand at 4874.666 kb on - strand at 4874.668 kb on + strand at 4874.668 kb on + strand at 4874.668 kb on + strand at 4874.753 kb on - strand, within AO353_22255 at 4874.845 kb on + strand, within AO353_22255 at 4874.845 kb on + strand, within AO353_22255 at 4874.845 kb on + strand, within AO353_22255 at 4874.846 kb on - strand, within AO353_22255 at 4874.846 kb on - strand, within AO353_22255 at 4874.846 kb on - strand, within AO353_22255 at 4874.846 kb on - strand, within AO353_22255 at 4874.931 kb on - strand, within AO353_22255 at 4874.931 kb on - strand, within AO353_22255 at 4874.931 kb on - strand, within AO353_22255 at 4874.938 kb on + strand, within AO353_22255 at 4874.939 kb on - strand, within AO353_22255 at 4874.939 kb on - strand, within AO353_22255 at 4874.939 kb on - strand, within AO353_22255 at 4874.939 kb on - strand, within AO353_22255 at 4874.939 kb on - strand, within AO353_22255 at 4875.095 kb on - strand, within AO353_22255 at 4875.095 kb on - strand, within AO353_22255 at 4875.211 kb on + strand, within AO353_22255 at 4875.212 kb on - strand, within AO353_22255 at 4875.220 kb on - strand, within AO353_22255 at 4875.220 kb on - strand, within AO353_22255 at 4875.220 kb on - strand, within AO353_22255 at 4875.285 kb on - strand, within AO353_22255 at 4875.285 kb on - strand, within AO353_22255 at 4875.488 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.502 kb on + strand at 4875.503 kb on - strand at 4875.503 kb on - strand at 4875.503 kb on - strand at 4875.503 kb on - strand at 4875.503 kb on - strand at 4875.503 kb on - strand at 4875.503 kb on - strand at 4876.034 kb on + strand at 4876.034 kb on + strand at 4876.035 kb on - strand at 4876.035 kb on - strand at 4876.035 kb on - strand at 4876.076 kb on + strand at 4876.076 kb on + strand at 4876.086 kb on + strand at 4876.086 kb on + strand at 4876.086 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.177 kb on + strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.178 kb on - strand at 4876.194 kb on + strand at 4876.279 kb on + strand, within AO353_22265 at 4876.279 kb on + strand, within AO353_22265 at 4876.280 kb on - strand, within AO353_22265 at 4876.280 kb on - strand, within AO353_22265
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,873,709 + +0.4 4,873,709 + -0.3 4,873,710 - -0.6 4,873,710 - -1.3 4,873,792 + -0.6 4,873,792 + -1.1 4,873,792 + +0.1 4,873,793 - -1.9 4,873,793 - -0.5 4,873,793 - -0.7 4,873,827 - -1.4 4,873,831 - +0.1 4,873,889 - -0.2 4,873,899 - +0.7 4,873,899 - +0.3 4,873,931 + -0.8 4,873,931 + -1.1 4,873,936 + -0.2 4,874,031 + +0.3 4,874,031 + -0.2 4,874,031 + -0.3 4,874,032 - +1.5 4,874,032 - -0.9 4,874,052 - -1.3 4,874,105 + AO353_22250 0.16 +0.5 4,874,106 - AO353_22250 0.17 +0.3 4,874,106 - AO353_22250 0.17 -1.3 4,874,193 + AO353_22250 0.32 -0.1 4,874,193 + AO353_22250 0.32 +0.0 4,874,194 - AO353_22250 0.32 +1.0 4,874,194 - AO353_22250 0.32 -0.5 4,874,194 - +0.9 4,874,194 - AO353_22250 0.32 -1.5 4,874,194 - AO353_22250 0.32 -1.2 4,874,237 + AO353_22250 0.39 +0.6 4,874,250 + AO353_22250 0.42 +0.7 4,874,250 + AO353_22250 0.42 -1.9 4,874,251 - AO353_22250 0.42 +0.3 4,874,251 - AO353_22250 0.42 -0.4 4,874,610 + -1.2 4,874,611 - +1.3 4,874,614 + -0.5 4,874,614 + -0.4 4,874,615 - +0.5 4,874,640 + -0.1 4,874,640 + -0.3 4,874,640 + +2.9 4,874,640 + -0.3 4,874,640 + -0.7 4,874,641 - -0.1 4,874,641 - -2.1 4,874,641 - -0.1 4,874,641 - +1.7 4,874,666 - +0.8 4,874,666 - +0.3 4,874,668 + +0.7 4,874,668 + -1.1 4,874,668 + +0.3 4,874,753 - AO353_22255 0.15 +0.6 4,874,845 + AO353_22255 0.26 -0.9 4,874,845 + AO353_22255 0.26 +1.3 4,874,845 + AO353_22255 0.26 -0.1 4,874,846 - AO353_22255 0.26 -1.2 4,874,846 - AO353_22255 0.26 +1.3 4,874,846 - AO353_22255 0.26 +1.3 4,874,846 - AO353_22255 0.26 +1.8 4,874,931 - AO353_22255 0.37 +2.1 4,874,931 - AO353_22255 0.37 -0.2 4,874,931 - AO353_22255 0.37 +0.8 4,874,938 + AO353_22255 0.37 -1.3 4,874,939 - AO353_22255 0.38 +1.3 4,874,939 - AO353_22255 0.38 -0.3 4,874,939 - AO353_22255 0.38 +0.9 4,874,939 - AO353_22255 0.38 -0.3 4,874,939 - AO353_22255 0.38 -0.1 4,875,095 - AO353_22255 0.56 -0.6 4,875,095 - AO353_22255 0.56 +1.3 4,875,211 + AO353_22255 0.71 +0.3 4,875,212 - AO353_22255 0.71 -0.5 4,875,220 - AO353_22255 0.72 +1.3 4,875,220 - AO353_22255 0.72 +0.0 4,875,220 - AO353_22255 0.72 -0.2 4,875,285 - AO353_22255 0.80 +2.9 4,875,285 - AO353_22255 0.80 +1.4 4,875,488 + -0.1 4,875,502 + -0.3 4,875,502 + +1.1 4,875,502 + -0.1 4,875,502 + -0.2 4,875,502 + +0.3 4,875,502 + +0.6 4,875,502 + +1.3 4,875,502 + -1.1 4,875,502 + -1.7 4,875,502 + -0.4 4,875,503 - +0.8 4,875,503 - -1.1 4,875,503 - +0.4 4,875,503 - +0.9 4,875,503 - +0.9 4,875,503 - -1.5 4,875,503 - +0.3 4,876,034 + -0.3 4,876,034 + +0.1 4,876,035 - -0.3 4,876,035 - -1.7 4,876,035 - -0.8 4,876,076 + -1.7 4,876,076 + +0.2 4,876,086 + -0.3 4,876,086 + -0.6 4,876,086 + -0.3 4,876,177 + -0.1 4,876,177 + -0.5 4,876,177 + -1.3 4,876,177 + -0.3 4,876,177 + -0.5 4,876,177 + +0.0 4,876,177 + -0.3 4,876,177 + +1.5 4,876,178 - +0.1 4,876,178 - -1.5 4,876,178 - +0.3 4,876,178 - -1.0 4,876,178 - -0.7 4,876,178 - +0.3 4,876,178 - -0.1 4,876,178 - -1.1 4,876,194 + -1.6 4,876,279 + AO353_22265 0.11 +0.9 4,876,279 + AO353_22265 0.11 -1.0 4,876,280 - AO353_22265 0.11 +0.5 4,876,280 - AO353_22265 0.11 +1.3
Or see this region's nucleotide sequence