Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21620 and AO353_21625 are separated by 111 nucleotides AO353_21625 and AO353_21630 are separated by 168 nucleotides AO353_21630 and AO353_21635 are separated by 81 nucleotides AO353_21635 and AO353_21640 overlap by 4 nucleotides
AO353_21620: AO353_21620 - peptidylprolyl isomerase, at 4,740,215 to 4,742,506
_21620
AO353_21625: AO353_21625 - Fe/S biogenesis protein NfuA, at 4,742,618 to 4,743,202
_21625
AO353_21630: AO353_21630 - precorrin-4 C11-methyltransferase, at 4,743,371 to 4,744,117
_21630
AO353_21635: AO353_21635 - cobalamin biosynthesis protein CobE, at 4,744,199 to 4,744,612
_21635
AO353_21640: AO353_21640 - cobalt transporter, at 4,744,609 to 4,745,310
_21640
Position (kb)
4743
4744
4745 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4742.420 kb on + strand at 4742.433 kb on + strand at 4742.434 kb on - strand at 4742.434 kb on - strand at 4742.434 kb on - strand at 4742.434 kb on - strand at 4742.434 kb on - strand at 4742.441 kb on + strand at 4742.441 kb on + strand at 4742.441 kb on + strand at 4742.442 kb on - strand at 4742.442 kb on - strand at 4742.443 kb on + strand at 4742.443 kb on + strand at 4742.443 kb on + strand at 4742.475 kb on + strand at 4742.475 kb on + strand at 4742.476 kb on - strand at 4742.587 kb on + strand at 4742.587 kb on + strand at 4742.588 kb on - strand at 4742.588 kb on - strand at 4742.588 kb on - strand at 4742.629 kb on + strand at 4742.632 kb on + strand at 4742.632 kb on + strand at 4742.632 kb on + strand at 4742.632 kb on + strand at 4742.655 kb on - strand at 4742.732 kb on + strand, within AO353_21625 at 4742.817 kb on - strand, within AO353_21625 at 4742.963 kb on + strand, within AO353_21625 at 4742.963 kb on + strand, within AO353_21625 at 4742.966 kb on + strand, within AO353_21625 at 4742.967 kb on - strand, within AO353_21625 at 4743.194 kb on + strand at 4743.195 kb on - strand at 4743.195 kb on - strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.197 kb on + strand at 4743.198 kb on - strand at 4743.198 kb on - strand at 4743.198 kb on - strand at 4743.198 kb on - strand at 4743.200 kb on + strand at 4743.200 kb on + strand at 4743.200 kb on + strand at 4743.200 kb on + strand at 4743.200 kb on + strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.201 kb on - strand at 4743.381 kb on + strand at 4743.467 kb on - strand, within AO353_21630 at 4743.996 kb on - strand, within AO353_21630 at 4744.008 kb on - strand, within AO353_21630 at 4744.008 kb on - strand, within AO353_21630 at 4744.023 kb on + strand, within AO353_21630 at 4744.023 kb on + strand, within AO353_21630 at 4744.107 kb on + strand at 4744.107 kb on + strand at 4744.107 kb on + strand at 4744.108 kb on - strand at 4744.108 kb on - strand at 4744.236 kb on + strand at 4744.237 kb on - strand at 4744.320 kb on + strand, within AO353_21635 at 4744.374 kb on + strand, within AO353_21635 at 4744.493 kb on + strand, within AO353_21635 at 4744.493 kb on + strand at 4744.493 kb on + strand, within AO353_21635 at 4744.494 kb on - strand, within AO353_21635 at 4744.494 kb on - strand, within AO353_21635 at 4745.073 kb on + strand, within AO353_21640
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,742,420 + -1.1 4,742,433 + +0.2 4,742,434 - -0.1 4,742,434 - -0.3 4,742,434 - +0.5 4,742,434 - +1.1 4,742,434 - +0.1 4,742,441 + +0.4 4,742,441 + +0.9 4,742,441 + +0.8 4,742,442 - -0.1 4,742,442 - +0.1 4,742,443 + -1.2 4,742,443 + +0.2 4,742,443 + -0.4 4,742,475 + -0.1 4,742,475 + +0.2 4,742,476 - +0.3 4,742,587 + -0.5 4,742,587 + +0.6 4,742,588 - +0.6 4,742,588 - +0.6 4,742,588 - +0.6 4,742,629 + +1.3 4,742,632 + +0.6 4,742,632 + +0.5 4,742,632 + +0.3 4,742,632 + +0.3 4,742,655 - +0.6 4,742,732 + AO353_21625 0.19 -0.1 4,742,817 - AO353_21625 0.34 -1.0 4,742,963 + AO353_21625 0.59 +0.3 4,742,963 + AO353_21625 0.59 +2.5 4,742,966 + AO353_21625 0.59 -0.8 4,742,967 - AO353_21625 0.60 +0.7 4,743,194 + -0.6 4,743,195 - +1.1 4,743,195 - -1.0 4,743,197 + -0.4 4,743,197 + +0.3 4,743,197 + +1.1 4,743,197 + -0.5 4,743,197 + +0.4 4,743,197 + +0.3 4,743,197 + -0.2 4,743,197 + -0.6 4,743,198 - +0.0 4,743,198 - +0.6 4,743,198 - +2.8 4,743,198 - +1.3 4,743,200 + -0.9 4,743,200 + +0.8 4,743,200 + -0.9 4,743,200 + -0.0 4,743,200 + -1.3 4,743,201 - +0.3 4,743,201 - -0.1 4,743,201 - -0.6 4,743,201 - +0.3 4,743,201 - -1.9 4,743,201 - +1.1 4,743,201 - -0.7 4,743,201 - -0.5 4,743,201 - -0.7 4,743,201 - -0.6 4,743,201 - +0.4 4,743,201 - +1.3 4,743,381 + -0.3 4,743,467 - AO353_21630 0.13 -1.5 4,743,996 - AO353_21630 0.84 +0.5 4,744,008 - AO353_21630 0.85 -2.6 4,744,008 - AO353_21630 0.85 -3.2 4,744,023 + AO353_21630 0.87 -1.4 4,744,023 + AO353_21630 0.87 +0.9 4,744,107 + +0.3 4,744,107 + +0.9 4,744,107 + +0.5 4,744,108 - +0.6 4,744,108 - -0.7 4,744,236 + -0.0 4,744,237 - +0.6 4,744,320 + AO353_21635 0.29 -1.1 4,744,374 + AO353_21635 0.42 -0.0 4,744,493 + AO353_21635 0.71 -0.8 4,744,493 + +1.3 4,744,493 + AO353_21635 0.71 -0.4 4,744,494 - AO353_21635 0.71 +0.7 4,744,494 - AO353_21635 0.71 -0.9 4,745,073 + AO353_21640 0.66 -0.4
Or see this region's nucleotide sequence