Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21385 and AO353_21390 are separated by 176 nucleotides AO353_21390 and AO353_21395 are separated by 165 nucleotides
AO353_21385: AO353_21385 - m-Inositol ABC transporter, ATPase component (itaA) (from data) , at 4,682,065 to 4,683,630
_21385
AO353_21390: AO353_21390 - m-Inositol ABC transporter, permease component (iatP) (from data) , at 4,683,807 to 4,684,829
_21390
AO353_21395: AO353_21395 - porin, at 4,684,995 to 4,686,344
_21395
Position (kb)
4683
4684
4685 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4683.084 kb on - strand, within AO353_21385 at 4683.087 kb on + strand, within AO353_21385 at 4683.087 kb on + strand, within AO353_21385 at 4683.088 kb on - strand, within AO353_21385 at 4683.088 kb on - strand, within AO353_21385 at 4683.229 kb on - strand, within AO353_21385 at 4683.316 kb on - strand, within AO353_21385 at 4683.436 kb on + strand, within AO353_21385 at 4683.437 kb on - strand, within AO353_21385 at 4683.451 kb on + strand, within AO353_21385 at 4683.452 kb on - strand, within AO353_21385 at 4683.452 kb on - strand, within AO353_21385 at 4683.620 kb on + strand at 4683.620 kb on + strand at 4683.620 kb on + strand at 4683.621 kb on - strand at 4683.628 kb on + strand at 4683.628 kb on + strand at 4683.628 kb on + strand at 4683.628 kb on + strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.629 kb on - strand at 4683.706 kb on + strand at 4683.706 kb on + strand at 4683.709 kb on - strand at 4683.709 kb on - strand at 4683.709 kb on - strand at 4683.713 kb on + strand at 4683.713 kb on + strand at 4683.714 kb on - strand at 4683.714 kb on - strand at 4683.714 kb on - strand at 4683.714 kb on - strand at 4683.770 kb on + strand at 4683.771 kb on - strand at 4683.806 kb on + strand at 4683.881 kb on + strand at 4683.882 kb on - strand at 4683.882 kb on - strand at 4684.299 kb on + strand, within AO353_21390 at 4684.299 kb on + strand, within AO353_21390 at 4684.302 kb on + strand, within AO353_21390 at 4684.302 kb on + strand, within AO353_21390 at 4684.303 kb on - strand, within AO353_21390 at 4684.341 kb on + strand, within AO353_21390 at 4684.341 kb on + strand, within AO353_21390 at 4684.341 kb on + strand, within AO353_21390 at 4684.341 kb on + strand, within AO353_21390 at 4684.342 kb on - strand, within AO353_21390 at 4684.342 kb on - strand, within AO353_21390 at 4684.419 kb on + strand, within AO353_21390 at 4684.428 kb on + strand, within AO353_21390 at 4684.428 kb on + strand, within AO353_21390 at 4684.428 kb on + strand, within AO353_21390 at 4684.428 kb on + strand, within AO353_21390 at 4684.429 kb on - strand, within AO353_21390 at 4684.429 kb on - strand, within AO353_21390 at 4684.434 kb on - strand, within AO353_21390 at 4684.434 kb on - strand, within AO353_21390 at 4684.434 kb on - strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.437 kb on + strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.438 kb on - strand, within AO353_21390 at 4684.443 kb on + strand, within AO353_21390 at 4684.443 kb on + strand, within AO353_21390 at 4684.443 kb on + strand, within AO353_21390 at 4684.444 kb on - strand, within AO353_21390 at 4684.444 kb on - strand, within AO353_21390 at 4684.515 kb on + strand, within AO353_21390 at 4684.602 kb on + strand, within AO353_21390 at 4684.602 kb on + strand, within AO353_21390 at 4684.602 kb on + strand, within AO353_21390 at 4684.602 kb on + strand, within AO353_21390 at 4684.603 kb on - strand, within AO353_21390 at 4684.603 kb on - strand, within AO353_21390 at 4684.603 kb on - strand, within AO353_21390 at 4684.603 kb on - strand, within AO353_21390 at 4684.603 kb on - strand, within AO353_21390 at 4684.743 kb on + strand at 4684.743 kb on + strand at 4684.743 kb on + strand at 4684.743 kb on + strand at 4684.744 kb on - strand at 4684.846 kb on - strand at 4684.846 kb on - strand at 4684.891 kb on + strand at 4684.901 kb on + strand at 4684.929 kb on + strand at 4684.929 kb on + strand at 4684.929 kb on + strand at 4684.930 kb on - strand at 4684.930 kb on - strand at 4684.949 kb on + strand at 4684.949 kb on + strand at 4684.950 kb on - strand at 4684.950 kb on - strand at 4684.950 kb on - strand at 4684.950 kb on - strand at 4684.950 kb on - strand at 4684.950 kb on - strand at 4684.973 kb on - strand at 4684.978 kb on + strand at 4684.978 kb on + strand at 4684.978 kb on + strand at 4684.979 kb on - strand at 4685.002 kb on + strand at 4685.019 kb on + strand at 4685.019 kb on + strand at 4685.019 kb on + strand at 4685.020 kb on - strand at 4685.020 kb on - strand at 4685.155 kb on - strand, within AO353_21395 at 4685.209 kb on - strand, within AO353_21395 at 4685.209 kb on - strand, within AO353_21395 at 4685.209 kb on - strand, within AO353_21395 at 4685.376 kb on + strand, within AO353_21395 at 4685.377 kb on - strand, within AO353_21395 at 4685.377 kb on - strand, within AO353_21395 at 4685.397 kb on + strand, within AO353_21395 at 4685.583 kb on + strand, within AO353_21395 at 4685.583 kb on + strand, within AO353_21395 at 4685.584 kb on - strand, within AO353_21395 at 4685.584 kb on - strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.622 kb on + strand, within AO353_21395 at 4685.623 kb on - strand, within AO353_21395 at 4685.623 kb on - strand, within AO353_21395 at 4685.641 kb on + strand, within AO353_21395 at 4685.641 kb on + strand, within AO353_21395 at 4685.642 kb on - strand, within AO353_21395 at 4685.642 kb on - strand, within AO353_21395 at 4685.642 kb on - strand, within AO353_21395 at 4685.642 kb on - strand, within AO353_21395 at 4685.661 kb on + strand, within AO353_21395 at 4685.661 kb on + strand, within AO353_21395 at 4685.661 kb on + strand, within AO353_21395 at 4685.661 kb on + strand, within AO353_21395 at 4685.661 kb on + strand, within AO353_21395 at 4685.662 kb on - strand, within AO353_21395 at 4685.662 kb on - strand, within AO353_21395 at 4685.734 kb on + strand, within AO353_21395 at 4685.735 kb on - strand, within AO353_21395 at 4685.802 kb on + strand, within AO353_21395 at 4685.802 kb on + strand at 4685.802 kb on + strand, within AO353_21395 at 4685.802 kb on + strand, within AO353_21395 at 4685.802 kb on + strand, within AO353_21395 at 4685.802 kb on + strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.803 kb on - strand, within AO353_21395 at 4685.805 kb on + strand, within AO353_21395 at 4685.805 kb on + strand, within AO353_21395 at 4685.805 kb on + strand, within AO353_21395 at 4685.805 kb on + strand, within AO353_21395 at 4685.805 kb on + strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395 at 4685.806 kb on - strand, within AO353_21395
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,683,084 - AO353_21385 0.65 -1.5 4,683,087 + AO353_21385 0.65 -2.6 4,683,087 + AO353_21385 0.65 -2.6 4,683,088 - AO353_21385 0.65 -2.6 4,683,088 - AO353_21385 0.65 -2.3 4,683,229 - AO353_21385 0.74 -1.3 4,683,316 - AO353_21385 0.80 -1.5 4,683,436 + AO353_21385 0.88 +0.3 4,683,437 - AO353_21385 0.88 -1.5 4,683,451 + AO353_21385 0.89 -3.3 4,683,452 - AO353_21385 0.89 -1.4 4,683,452 - AO353_21385 0.89 -1.3 4,683,620 + -3.7 4,683,620 + -1.7 4,683,620 + -1.7 4,683,621 - -0.3 4,683,628 + -1.9 4,683,628 + -2.5 4,683,628 + -2.3 4,683,628 + -2.6 4,683,629 - -2.8 4,683,629 - -1.3 4,683,629 - -1.8 4,683,629 - -2.0 4,683,629 - -3.6 4,683,629 - -0.3 4,683,629 - -2.7 4,683,629 - -0.7 4,683,706 + -2.1 4,683,706 + -2.6 4,683,709 - -2.0 4,683,709 - -2.1 4,683,709 - -0.8 4,683,713 + -1.7 4,683,713 + -2.1 4,683,714 - -2.0 4,683,714 - -1.5 4,683,714 - -1.3 4,683,714 - -2.7 4,683,770 + -1.7 4,683,771 - -2.5 4,683,806 + -3.2 4,683,881 + -1.5 4,683,882 - -4.1 4,683,882 - -2.8 4,684,299 + AO353_21390 0.48 -2.1 4,684,299 + AO353_21390 0.48 -2.1 4,684,302 + AO353_21390 0.48 -2.8 4,684,302 + AO353_21390 0.48 -0.7 4,684,303 - AO353_21390 0.48 -2.7 4,684,341 + AO353_21390 0.52 -1.4 4,684,341 + AO353_21390 0.52 -1.3 4,684,341 + AO353_21390 0.52 -0.1 4,684,341 + AO353_21390 0.52 -1.7 4,684,342 - AO353_21390 0.52 -2.6 4,684,342 - AO353_21390 0.52 -2.3 4,684,419 + AO353_21390 0.60 -1.0 4,684,428 + AO353_21390 0.61 -1.3 4,684,428 + AO353_21390 0.61 +1.3 4,684,428 + AO353_21390 0.61 -1.0 4,684,428 + AO353_21390 0.61 -0.3 4,684,429 - AO353_21390 0.61 -2.1 4,684,429 - AO353_21390 0.61 +0.3 4,684,434 - AO353_21390 0.61 -1.5 4,684,434 - AO353_21390 0.61 -2.0 4,684,434 - AO353_21390 0.61 -1.3 4,684,437 + AO353_21390 0.62 -2.4 4,684,437 + AO353_21390 0.62 -0.1 4,684,437 + AO353_21390 0.62 -2.1 4,684,437 + AO353_21390 0.62 -1.5 4,684,437 + AO353_21390 0.62 -1.5 4,684,437 + AO353_21390 0.62 -1.4 4,684,437 + AO353_21390 0.62 -2.0 4,684,437 + AO353_21390 0.62 -1.0 4,684,437 + AO353_21390 0.62 -1.0 4,684,437 + AO353_21390 0.62 -0.4 4,684,438 - AO353_21390 0.62 -2.6 4,684,438 - AO353_21390 0.62 -1.4 4,684,438 - AO353_21390 0.62 -2.8 4,684,438 - AO353_21390 0.62 -1.0 4,684,438 - AO353_21390 0.62 -1.3 4,684,438 - AO353_21390 0.62 -1.0 4,684,438 - AO353_21390 0.62 -3.7 4,684,438 - AO353_21390 0.62 -1.0 4,684,438 - AO353_21390 0.62 -1.8 4,684,438 - AO353_21390 0.62 -0.7 4,684,443 + AO353_21390 0.62 -1.5 4,684,443 + AO353_21390 0.62 -3.5 4,684,443 + AO353_21390 0.62 +0.3 4,684,444 - AO353_21390 0.62 -3.3 4,684,444 - AO353_21390 0.62 -1.5 4,684,515 + AO353_21390 0.69 -2.3 4,684,602 + AO353_21390 0.78 -1.8 4,684,602 + AO353_21390 0.78 -1.3 4,684,602 + AO353_21390 0.78 -1.3 4,684,602 + AO353_21390 0.78 -1.5 4,684,603 - AO353_21390 0.78 -2.1 4,684,603 - AO353_21390 0.78 -2.9 4,684,603 - AO353_21390 0.78 -2.7 4,684,603 - AO353_21390 0.78 -3.3 4,684,603 - AO353_21390 0.78 -1.7 4,684,743 + -1.3 4,684,743 + -2.8 4,684,743 + -1.8 4,684,743 + -2.8 4,684,744 - -0.7 4,684,846 - -0.7 4,684,846 - -1.0 4,684,891 + -1.8 4,684,901 + -0.3 4,684,929 + +0.7 4,684,929 + +0.3 4,684,929 + +2.1 4,684,930 - -1.0 4,684,930 - -1.5 4,684,949 + +0.5 4,684,949 + +0.7 4,684,950 - -0.7 4,684,950 - -1.5 4,684,950 - -0.9 4,684,950 - -2.6 4,684,950 - +0.6 4,684,950 - +1.5 4,684,973 - -2.1 4,684,978 + +0.0 4,684,978 + +0.7 4,684,978 + -1.5 4,684,979 - -0.1 4,685,002 + +0.8 4,685,019 + +0.5 4,685,019 + +0.2 4,685,019 + +0.0 4,685,020 - +0.3 4,685,020 - -0.5 4,685,155 - AO353_21395 0.12 -0.5 4,685,209 - AO353_21395 0.16 -0.4 4,685,209 - AO353_21395 0.16 +0.3 4,685,209 - AO353_21395 0.16 +0.3 4,685,376 + AO353_21395 0.28 -0.3 4,685,377 - AO353_21395 0.28 +1.0 4,685,377 - AO353_21395 0.28 +0.3 4,685,397 + AO353_21395 0.30 -1.0 4,685,583 + AO353_21395 0.44 +1.3 4,685,583 + AO353_21395 0.44 -1.1 4,685,584 - AO353_21395 0.44 +0.3 4,685,584 - AO353_21395 0.44 +0.7 4,685,622 + AO353_21395 0.46 +0.6 4,685,622 + AO353_21395 0.46 +0.4 4,685,622 + AO353_21395 0.46 -2.1 4,685,622 + AO353_21395 0.46 -0.1 4,685,622 + AO353_21395 0.46 -1.1 4,685,622 + AO353_21395 0.46 -1.4 4,685,622 + AO353_21395 0.46 -1.7 4,685,623 - AO353_21395 0.47 +0.5 4,685,623 - AO353_21395 0.47 +0.7 4,685,641 + AO353_21395 0.48 -0.3 4,685,641 + AO353_21395 0.48 +0.7 4,685,642 - AO353_21395 0.48 -0.4 4,685,642 - AO353_21395 0.48 -0.3 4,685,642 - AO353_21395 0.48 +0.9 4,685,642 - AO353_21395 0.48 -0.1 4,685,661 + AO353_21395 0.49 +0.7 4,685,661 + AO353_21395 0.49 +0.6 4,685,661 + AO353_21395 0.49 +0.7 4,685,661 + AO353_21395 0.49 -0.3 4,685,661 + AO353_21395 0.49 -0.1 4,685,662 - AO353_21395 0.49 +0.2 4,685,662 - AO353_21395 0.49 +0.0 4,685,734 + AO353_21395 0.55 -0.5 4,685,735 - AO353_21395 0.55 +0.0 4,685,802 + AO353_21395 0.60 +0.3 4,685,802 + +0.3 4,685,802 + AO353_21395 0.60 -1.8 4,685,802 + AO353_21395 0.60 +0.6 4,685,802 + AO353_21395 0.60 -2.3 4,685,802 + AO353_21395 0.60 -0.7 4,685,803 - AO353_21395 0.60 +0.5 4,685,803 - AO353_21395 0.60 +0.6 4,685,803 - AO353_21395 0.60 +1.1 4,685,803 - AO353_21395 0.60 +0.8 4,685,803 - AO353_21395 0.60 -0.1 4,685,803 - AO353_21395 0.60 -1.3 4,685,803 - AO353_21395 0.60 -1.4 4,685,805 + AO353_21395 0.60 +0.2 4,685,805 + AO353_21395 0.60 +0.0 4,685,805 + AO353_21395 0.60 -0.3 4,685,805 + AO353_21395 0.60 -1.1 4,685,805 + AO353_21395 0.60 +0.6 4,685,806 - AO353_21395 0.60 -0.1 4,685,806 - AO353_21395 0.60 -0.5 4,685,806 - AO353_21395 0.60 -0.4 4,685,806 - AO353_21395 0.60 -0.5 4,685,806 - AO353_21395 0.60 +0.2 4,685,806 - AO353_21395 0.60 +0.0 4,685,806 - AO353_21395 0.60 +0.8
Or see this region's nucleotide sequence