Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20675 and AO353_20680 overlap by 17 nucleotides AO353_20680 and AO353_20685 are separated by 98 nucleotides AO353_20685 and AO353_20690 are separated by 41 nucleotides
AO353_20675: AO353_20675 - bifunctional folylpolyglutamate synthase/dihydrofolate synthase, at 4,536,535 to 4,537,842
_20675
AO353_20680: AO353_20680 - cell division protein, at 4,537,826 to 4,538,482
_20680
AO353_20685: AO353_20685 - colicin V production CvpA, at 4,538,581 to 4,539,141
_20685
AO353_20690: AO353_20690 - amidophosphoribosyltransferase, at 4,539,183 to 4,540,688
_20690
Position (kb)
4538
4539
4540 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4537.847 kb on + strand at 4537.848 kb on - strand at 4538.063 kb on - strand, within AO353_20680 at 4538.063 kb on - strand, within AO353_20680 at 4538.330 kb on + strand, within AO353_20680 at 4538.330 kb on + strand, within AO353_20680 at 4538.330 kb on + strand, within AO353_20680 at 4538.330 kb on + strand, within AO353_20680 at 4538.330 kb on + strand, within AO353_20680 at 4538.331 kb on - strand, within AO353_20680 at 4538.331 kb on - strand, within AO353_20680 at 4538.339 kb on + strand, within AO353_20680 at 4538.339 kb on + strand, within AO353_20680 at 4538.339 kb on + strand, within AO353_20680 at 4538.340 kb on - strand, within AO353_20680 at 4538.340 kb on - strand, within AO353_20680 at 4538.486 kb on + strand at 4538.486 kb on + strand at 4538.487 kb on - strand at 4538.524 kb on - strand at 4538.570 kb on + strand at 4538.589 kb on + strand at 4538.589 kb on + strand at 4538.590 kb on - strand at 4538.590 kb on - strand at 4538.590 kb on - strand at 4538.737 kb on + strand, within AO353_20685 at 4538.738 kb on - strand, within AO353_20685 at 4538.810 kb on + strand, within AO353_20685 at 4538.810 kb on + strand, within AO353_20685 at 4538.810 kb on + strand, within AO353_20685 at 4538.811 kb on - strand, within AO353_20685 at 4538.813 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.833 kb on + strand, within AO353_20685 at 4538.834 kb on - strand, within AO353_20685 at 4538.834 kb on - strand, within AO353_20685 at 4538.834 kb on - strand, within AO353_20685 at 4538.839 kb on - strand, within AO353_20685 at 4538.973 kb on + strand, within AO353_20685 at 4538.973 kb on + strand, within AO353_20685 at 4538.973 kb on + strand, within AO353_20685 at 4538.974 kb on - strand, within AO353_20685 at 4539.011 kb on + strand, within AO353_20685 at 4539.041 kb on + strand, within AO353_20685 at 4539.041 kb on + strand, within AO353_20685 at 4539.041 kb on + strand, within AO353_20685 at 4539.041 kb on + strand, within AO353_20685 at 4539.044 kb on + strand, within AO353_20685 at 4539.044 kb on + strand, within AO353_20685 at 4539.044 kb on + strand, within AO353_20685 at 4539.044 kb on + strand, within AO353_20685 at 4539.044 kb on + strand, within AO353_20685 at 4539.083 kb on + strand, within AO353_20685 at 4539.095 kb on + strand at 4539.095 kb on + strand at 4539.164 kb on + strand at 4539.164 kb on + strand at 4539.165 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,537,847 + -2.5 4,537,848 - -0.3 4,538,063 - AO353_20680 0.36 +0.4 4,538,063 - AO353_20680 0.36 -0.8 4,538,330 + AO353_20680 0.77 +0.2 4,538,330 + AO353_20680 0.77 -1.2 4,538,330 + AO353_20680 0.77 -1.2 4,538,330 + AO353_20680 0.77 -0.1 4,538,330 + AO353_20680 0.77 +0.6 4,538,331 - AO353_20680 0.77 -1.2 4,538,331 - AO353_20680 0.77 +1.4 4,538,339 + AO353_20680 0.78 +0.6 4,538,339 + AO353_20680 0.78 +0.0 4,538,339 + AO353_20680 0.78 -2.3 4,538,340 - AO353_20680 0.78 -0.5 4,538,340 - AO353_20680 0.78 +0.4 4,538,486 + -1.1 4,538,486 + -0.5 4,538,487 - -1.8 4,538,524 - +0.2 4,538,570 + -2.0 4,538,589 + +0.8 4,538,589 + -0.4 4,538,590 - -0.4 4,538,590 - +1.4 4,538,590 - -0.6 4,538,737 + AO353_20685 0.28 -0.1 4,538,738 - AO353_20685 0.28 -0.6 4,538,810 + AO353_20685 0.41 -1.2 4,538,810 + AO353_20685 0.41 -1.0 4,538,810 + AO353_20685 0.41 -1.1 4,538,811 - AO353_20685 0.41 -0.5 4,538,813 + AO353_20685 0.41 -1.0 4,538,833 + AO353_20685 0.45 -1.1 4,538,833 + AO353_20685 0.45 -1.4 4,538,833 + AO353_20685 0.45 -1.6 4,538,833 + AO353_20685 0.45 -0.2 4,538,833 + AO353_20685 0.45 -1.1 4,538,833 + AO353_20685 0.45 +0.4 4,538,833 + AO353_20685 0.45 -2.4 4,538,833 + AO353_20685 0.45 -1.2 4,538,833 + AO353_20685 0.45 -1.8 4,538,834 - AO353_20685 0.45 -0.4 4,538,834 - AO353_20685 0.45 -1.2 4,538,834 - AO353_20685 0.45 -0.5 4,538,839 - AO353_20685 0.46 +0.1 4,538,973 + AO353_20685 0.70 -0.2 4,538,973 + AO353_20685 0.70 -0.6 4,538,973 + AO353_20685 0.70 -1.5 4,538,974 - AO353_20685 0.70 -0.2 4,539,011 + AO353_20685 0.77 -0.1 4,539,041 + AO353_20685 0.82 +0.0 4,539,041 + AO353_20685 0.82 +0.0 4,539,041 + AO353_20685 0.82 -0.8 4,539,041 + AO353_20685 0.82 -2.3 4,539,044 + AO353_20685 0.83 -0.1 4,539,044 + AO353_20685 0.83 -1.3 4,539,044 + AO353_20685 0.83 -0.6 4,539,044 + AO353_20685 0.83 -0.9 4,539,044 + AO353_20685 0.83 -0.6 4,539,083 + AO353_20685 0.89 +0.6 4,539,095 + +0.1 4,539,095 + -1.0 4,539,164 + -1.0 4,539,164 + +2.9 4,539,165 - -1.4
Or see this region's nucleotide sequence