Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20560 and AO353_20565 are separated by 189 nucleotides AO353_20565 and AO353_20570 are separated by 79 nucleotides AO353_20570 and AO353_20575 are separated by 53 nucleotides AO353_20575 and AO353_20580 are separated by 80 nucleotides AO353_20580 and AO353_20585 are separated by 182 nucleotides AO353_20585 and AO353_20590 are separated by 29 nucleotides AO353_20590 and AO353_20595 are separated by 47 nucleotides
AO353_20560: AO353_20560 - glutamate--tRNA ligase, at 4,513,006 to 4,514,487
_20560
AO353_20565: AO353_20565 - tRNA-Ala, at 4,514,677 to 4,514,752
_20565
AO353_20570: AO353_20570 - tRNA-Glu, at 4,514,832 to 4,514,907
_20570
AO353_20575: AO353_20575 - tRNA-Ala, at 4,514,961 to 4,515,036
_20575
AO353_20580: AO353_20580 - tRNA-Glu, at 4,515,117 to 4,515,192
_20580
AO353_20585: AO353_20585 - TetR family transcriptional regulator, at 4,515,375 to 4,515,914
_20585
AO353_20590: AO353_20590 - hydrolase, at 4,515,944 to 4,516,777
_20590
AO353_20595: AO353_20595 - 4-hydroxybenzoyl-CoA thioesterase, at 4,516,825 to 4,517,262
_20595
Position (kb) 4515
4516 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.491 kb on - strand at 4514.577 kb on + strand at 4514.684 kb on + strand at 4514.742 kb on + strand, within AO353_20565 at 4514.742 kb on + strand, within AO353_20565 at 4514.756 kb on + strand at 4514.912 kb on + strand at 4514.912 kb on + strand at 4515.026 kb on + strand, within AO353_20575 at 4515.082 kb on + strand at 4515.082 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.217 kb on + strand at 4515.217 kb on + strand at 4515.217 kb on + strand at 4515.458 kb on + strand, within AO353_20585 at 4515.491 kb on + strand, within AO353_20585 at 4515.492 kb on - strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.508 kb on - strand at 4515.642 kb on + strand, within AO353_20585 at 4515.642 kb on + strand, within AO353_20585 at 4515.910 kb on + strand at 4515.910 kb on + strand at 4515.910 kb on + strand at 4515.911 kb on - strand at 4515.911 kb on - strand at 4515.911 kb on - strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.954 kb on + strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4515.955 kb on - strand at 4516.212 kb on + strand, within AO353_20590 at 4516.213 kb on - strand, within AO353_20590 at 4516.562 kb on + strand, within AO353_20590 at 4516.563 kb on - strand, within AO353_20590 at 4516.573 kb on + strand, within AO353_20590 at 4516.573 kb on + strand, within AO353_20590 at 4516.786 kb on + strand at 4516.787 kb on - strand at 4516.851 kb on + strand at 4516.851 kb on + strand at 4516.852 kb on - strand at 4516.905 kb on + strand, within AO353_20595 at 4516.905 kb on + strand, within AO353_20595
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,514,490 + +1.8 4,514,490 + -1.0 4,514,490 + +0.5 4,514,490 + -1.6 4,514,490 + +0.8 4,514,491 - -0.0 4,514,577 + -0.2 4,514,684 + +1.4 4,514,742 + AO353_20565 0.86 -3.0 4,514,742 + AO353_20565 0.86 -2.4 4,514,756 + -1.1 4,514,912 + -0.6 4,514,912 + +0.0 4,515,026 + AO353_20575 0.86 +0.4 4,515,082 + +0.1 4,515,082 + +0.0 4,515,215 + -0.1 4,515,215 + -0.2 4,515,215 + +0.3 4,515,215 + +0.7 4,515,215 + -0.7 4,515,215 + +0.5 4,515,215 + +0.2 4,515,215 + +1.4 4,515,215 + -0.3 4,515,215 + -0.6 4,515,217 + +0.8 4,515,217 + -0.6 4,515,217 + +1.9 4,515,458 + AO353_20585 0.15 -1.6 4,515,491 + AO353_20585 0.21 -0.4 4,515,492 - AO353_20585 0.22 -0.6 4,515,507 + AO353_20585 0.24 +0.1 4,515,507 + AO353_20585 0.24 -0.8 4,515,507 + AO353_20585 0.24 -1.2 4,515,507 + AO353_20585 0.24 -1.6 4,515,508 - -1.4 4,515,642 + AO353_20585 0.49 -0.4 4,515,642 + AO353_20585 0.49 -0.6 4,515,910 + -1.4 4,515,910 + +0.0 4,515,910 + -0.4 4,515,911 - -1.2 4,515,911 - -0.2 4,515,911 - -1.1 4,515,954 + +0.4 4,515,954 + +1.1 4,515,954 + +1.2 4,515,954 + +0.1 4,515,954 + +1.4 4,515,954 + -0.2 4,515,954 + -0.4 4,515,954 + -0.6 4,515,954 + -0.3 4,515,955 - +0.0 4,515,955 - +0.6 4,515,955 - +0.8 4,515,955 - -0.8 4,515,955 - -0.1 4,516,212 + AO353_20590 0.32 -0.2 4,516,213 - AO353_20590 0.32 +1.2 4,516,562 + AO353_20590 0.74 +0.4 4,516,563 - AO353_20590 0.74 +1.4 4,516,573 + AO353_20590 0.75 -0.2 4,516,573 + AO353_20590 0.75 +0.8 4,516,786 + -0.6 4,516,787 - +1.1 4,516,851 + -1.4 4,516,851 + +0.2 4,516,852 - -0.6 4,516,905 + AO353_20595 0.18 -0.2 4,516,905 + AO353_20595 0.18 +0.0
Or see this region's nucleotide sequence