Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20560 and AO353_20565 are separated by 189 nucleotides AO353_20565 and AO353_20570 are separated by 79 nucleotides AO353_20570 and AO353_20575 are separated by 53 nucleotides AO353_20575 and AO353_20580 are separated by 80 nucleotides AO353_20580 and AO353_20585 are separated by 182 nucleotides
AO353_20560: AO353_20560 - glutamate--tRNA ligase, at 4,513,006 to 4,514,487
_20560
AO353_20565: AO353_20565 - tRNA-Ala, at 4,514,677 to 4,514,752
_20565
AO353_20570: AO353_20570 - tRNA-Glu, at 4,514,832 to 4,514,907
_20570
AO353_20575: AO353_20575 - tRNA-Ala, at 4,514,961 to 4,515,036
_20575
AO353_20580: AO353_20580 - tRNA-Glu, at 4,515,117 to 4,515,192
_20580
AO353_20585: AO353_20585 - TetR family transcriptional regulator, at 4,515,375 to 4,515,914
_20585
Position (kb)
4514
4515 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.490 kb on + strand at 4514.491 kb on - strand at 4514.577 kb on + strand at 4514.684 kb on + strand at 4514.742 kb on + strand, within AO353_20565 at 4514.742 kb on + strand, within AO353_20565 at 4514.756 kb on + strand at 4514.912 kb on + strand at 4514.912 kb on + strand at 4515.026 kb on + strand, within AO353_20575 at 4515.082 kb on + strand at 4515.082 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.215 kb on + strand at 4515.217 kb on + strand at 4515.217 kb on + strand at 4515.217 kb on + strand at 4515.458 kb on + strand, within AO353_20585 at 4515.491 kb on + strand, within AO353_20585 at 4515.492 kb on - strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.507 kb on + strand, within AO353_20585 at 4515.508 kb on - strand at 4515.642 kb on + strand, within AO353_20585 at 4515.642 kb on + strand, within AO353_20585
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,514,490 + +1.8 4,514,490 + -1.0 4,514,490 + +0.5 4,514,490 + -1.6 4,514,490 + +0.8 4,514,491 - -0.0 4,514,577 + -0.2 4,514,684 + +1.4 4,514,742 + AO353_20565 0.86 -3.0 4,514,742 + AO353_20565 0.86 -2.4 4,514,756 + -1.1 4,514,912 + -0.6 4,514,912 + +0.0 4,515,026 + AO353_20575 0.86 +0.4 4,515,082 + +0.1 4,515,082 + +0.0 4,515,215 + -0.1 4,515,215 + -0.2 4,515,215 + +0.3 4,515,215 + +0.7 4,515,215 + -0.7 4,515,215 + +0.5 4,515,215 + +0.2 4,515,215 + +1.4 4,515,215 + -0.3 4,515,215 + -0.6 4,515,217 + +0.8 4,515,217 + -0.6 4,515,217 + +1.9 4,515,458 + AO353_20585 0.15 -1.6 4,515,491 + AO353_20585 0.21 -0.4 4,515,492 - AO353_20585 0.22 -0.6 4,515,507 + AO353_20585 0.24 +0.1 4,515,507 + AO353_20585 0.24 -0.8 4,515,507 + AO353_20585 0.24 -1.2 4,515,507 + AO353_20585 0.24 -1.6 4,515,508 - -1.4 4,515,642 + AO353_20585 0.49 -0.4 4,515,642 + AO353_20585 0.49 -0.6
Or see this region's nucleotide sequence