Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20500 and AO353_20505 are separated by 1 nucleotides AO353_20505 and AO353_20510 are separated by 190 nucleotides AO353_20510 and AO353_20515 are separated by 10 nucleotides
AO353_20500: AO353_20500 - ADP-ribose pyrophosphatase, at 4,501,195 to 4,501,902
_20500
AO353_20505: AO353_20505 - cytidyltransferase, at 4,501,904 to 4,502,449
_20505
AO353_20510: AO353_20510 - amidase, at 4,502,640 to 4,503,287
_20510
AO353_20515: AO353_20515 - nicotinate phosphoribosyltransferase, at 4,503,298 to 4,504,527
_20515
Position (kb)
4502
4503
4504 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4501.924 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4502.079 kb on + strand, within AO353_20505 at 4502.134 kb on + strand, within AO353_20505 at 4502.178 kb on + strand, within AO353_20505 at 4502.178 kb on + strand, within AO353_20505 at 4502.178 kb on + strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.184 kb on + strand, within AO353_20505 at 4502.184 kb on + strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.261 kb on + strand, within AO353_20505 at 4502.261 kb on + strand, within AO353_20505 at 4502.261 kb on + strand, within AO353_20505 at 4502.262 kb on - strand, within AO353_20505 at 4502.262 kb on - strand, within AO353_20505 at 4502.304 kb on + strand, within AO353_20505 at 4502.305 kb on - strand, within AO353_20505 at 4502.438 kb on + strand at 4502.439 kb on - strand at 4502.439 kb on - strand at 4502.445 kb on + strand at 4502.445 kb on + strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.479 kb on + strand at 4502.532 kb on + strand at 4502.542 kb on - strand at 4502.542 kb on - strand at 4502.542 kb on - strand at 4502.956 kb on - strand, within AO353_20510 at 4502.962 kb on - strand, within AO353_20510 at 4503.013 kb on - strand, within AO353_20510 at 4503.054 kb on + strand, within AO353_20510 at 4503.315 kb on + strand at 4503.355 kb on + strand at 4503.355 kb on + strand at 4503.355 kb on + strand at 4503.355 kb on + strand at 4503.356 kb on - strand at 4503.356 kb on - strand at 4503.356 kb on - strand at 4503.356 kb on - strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.415 kb on + strand at 4503.415 kb on + strand at 4503.534 kb on + strand, within AO353_20515 at 4503.535 kb on - strand, within AO353_20515 at 4503.535 kb on - strand, within AO353_20515 at 4503.535 kb on - strand, within AO353_20515 at 4503.550 kb on + strand, within AO353_20515 at 4503.550 kb on + strand, within AO353_20515 at 4503.550 kb on + strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.604 kb on + strand, within AO353_20515 at 4503.605 kb on - strand, within AO353_20515 at 4503.605 kb on - strand, within AO353_20515 at 4503.727 kb on + strand, within AO353_20515 at 4503.727 kb on + strand, within AO353_20515 at 4503.728 kb on - strand, within AO353_20515 at 4503.766 kb on + strand, within AO353_20515 at 4503.766 kb on + strand, within AO353_20515 at 4503.944 kb on - strand, within AO353_20515 at 4504.060 kb on + strand, within AO353_20515 at 4504.060 kb on + strand, within AO353_20515 at 4504.061 kb on - strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.133 kb on - strand, within AO353_20515 at 4504.133 kb on - strand, within AO353_20515 at 4504.147 kb on + strand, within AO353_20515 at 4504.147 kb on + strand, within AO353_20515 at 4504.148 kb on - strand, within AO353_20515 at 4504.148 kb on - strand, within AO353_20515 at 4504.148 kb on - strand, within AO353_20515 at 4504.210 kb on + strand, within AO353_20515 at 4504.210 kb on + strand, within AO353_20515 at 4504.211 kb on - strand, within AO353_20515
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,501,924 - +1.1 4,501,933 - -0.6 4,501,933 - +0.5 4,501,933 - -0.4 4,501,933 - -0.8 4,501,933 - +1.1 4,501,933 - -0.2 4,502,079 + AO353_20505 0.32 -2.1 4,502,134 + AO353_20505 0.42 -0.6 4,502,178 + AO353_20505 0.50 +0.4 4,502,178 + AO353_20505 0.50 -0.0 4,502,178 + AO353_20505 0.50 +0.0 4,502,179 - AO353_20505 0.50 -0.1 4,502,179 - AO353_20505 0.50 -1.1 4,502,179 - AO353_20505 0.50 +1.1 4,502,179 - AO353_20505 0.50 +0.0 4,502,184 + AO353_20505 0.51 -1.4 4,502,184 + AO353_20505 0.51 +0.8 4,502,185 - AO353_20505 0.51 +0.3 4,502,185 - AO353_20505 0.51 +0.9 4,502,185 - AO353_20505 0.51 +0.0 4,502,185 - AO353_20505 0.51 -0.0 4,502,185 - AO353_20505 0.51 -0.5 4,502,261 + AO353_20505 0.65 +1.6 4,502,261 + AO353_20505 0.65 +0.6 4,502,261 + AO353_20505 0.65 -0.0 4,502,262 - AO353_20505 0.66 +0.0 4,502,262 - AO353_20505 0.66 -1.3 4,502,304 + AO353_20505 0.73 -0.4 4,502,305 - AO353_20505 0.73 +1.2 4,502,438 + -0.0 4,502,439 - -0.2 4,502,439 - -0.2 4,502,445 + -1.4 4,502,445 + +0.4 4,502,446 - +2.0 4,502,446 - -1.8 4,502,446 - +1.0 4,502,446 - +0.2 4,502,446 - -0.5 4,502,446 - -0.6 4,502,446 - -0.0 4,502,479 + +0.8 4,502,532 + -2.0 4,502,542 - -0.2 4,502,542 - +0.8 4,502,542 - -2.4 4,502,956 - AO353_20510 0.49 -0.7 4,502,962 - AO353_20510 0.50 -2.0 4,503,013 - AO353_20510 0.58 -0.2 4,503,054 + AO353_20510 0.64 -0.6 4,503,315 + -0.3 4,503,355 + -1.8 4,503,355 + +0.4 4,503,355 + -1.8 4,503,355 + +1.4 4,503,356 - -1.0 4,503,356 - +0.0 4,503,356 - +0.2 4,503,356 - -0.2 4,503,358 + -0.6 4,503,358 + +1.4 4,503,358 + -1.0 4,503,358 + +1.1 4,503,358 + +1.0 4,503,358 + -0.4 4,503,358 + -0.1 4,503,358 + +0.3 4,503,358 + -0.3 4,503,358 + +0.0 4,503,359 - -1.0 4,503,359 - -0.2 4,503,359 - -1.0 4,503,359 - +0.4 4,503,359 - +0.0 4,503,359 - -1.1 4,503,359 - -0.7 4,503,359 - -0.5 4,503,359 - +1.1 4,503,359 - -0.9 4,503,359 - -0.6 4,503,359 - -0.4 4,503,359 - +0.1 4,503,415 + +0.4 4,503,415 + +0.2 4,503,534 + AO353_20515 0.19 +0.9 4,503,535 - AO353_20515 0.19 +0.4 4,503,535 - AO353_20515 0.19 +0.4 4,503,535 - AO353_20515 0.19 -0.6 4,503,550 + AO353_20515 0.20 +0.0 4,503,550 + AO353_20515 0.20 -2.2 4,503,550 + AO353_20515 0.20 +0.6 4,503,551 - AO353_20515 0.21 +0.1 4,503,551 - AO353_20515 0.21 -0.2 4,503,551 - AO353_20515 0.21 -0.4 4,503,551 - AO353_20515 0.21 -1.0 4,503,604 + AO353_20515 0.25 -0.4 4,503,605 - AO353_20515 0.25 -1.2 4,503,605 - AO353_20515 0.25 +0.2 4,503,727 + AO353_20515 0.35 -0.1 4,503,727 + AO353_20515 0.35 +0.6 4,503,728 - AO353_20515 0.35 +0.8 4,503,766 + AO353_20515 0.38 +0.1 4,503,766 + AO353_20515 0.38 +0.7 4,503,944 - AO353_20515 0.53 +0.7 4,504,060 + AO353_20515 0.62 -0.7 4,504,060 + AO353_20515 0.62 -0.2 4,504,061 - AO353_20515 0.62 +1.4 4,504,132 + AO353_20515 0.68 -0.5 4,504,132 + AO353_20515 0.68 -2.1 4,504,132 + AO353_20515 0.68 +0.5 4,504,132 + AO353_20515 0.68 +0.1 4,504,133 - AO353_20515 0.68 -0.2 4,504,133 - AO353_20515 0.68 +2.4 4,504,147 + AO353_20515 0.69 -0.2 4,504,147 + AO353_20515 0.69 -1.6 4,504,148 - AO353_20515 0.69 -0.8 4,504,148 - AO353_20515 0.69 -0.6 4,504,148 - AO353_20515 0.69 -0.4 4,504,210 + AO353_20515 0.74 +0.0 4,504,210 + AO353_20515 0.74 -0.1 4,504,211 - AO353_20515 0.74 +1.9
Or see this region's nucleotide sequence