Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_15915 and AO353_15920 overlap by 13 nucleotides AO353_15920 and AO353_15925 are separated by 93 nucleotides AO353_15925 and AO353_15930 are separated by 423 nucleotides
AO353_15915: AO353_15915 - aminotransferase, at 3,512,031 to 3,513,179
_15915
AO353_15920: AO353_15920 - carbon-nitrogen hydrolase, at 3,513,167 to 3,513,958
_15920
AO353_15925: AO353_15925 - 2-isopropylmalate synthase, at 3,514,052 to 3,515,731
_15925
AO353_15930: AO353_15930 - peptidase M23, at 3,516,155 to 3,516,976
_15930
Position (kb)
3514
3515
3516 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3513.082 kb on - strand at 3513.166 kb on + strand at 3513.166 kb on + strand at 3513.166 kb on + strand at 3513.166 kb on + strand at 3513.166 kb on + strand at 3513.166 kb on + strand at 3513.166 kb on + strand at 3513.167 kb on - strand at 3513.167 kb on - strand at 3513.167 kb on - strand at 3513.167 kb on - strand at 3513.167 kb on - strand at 3513.376 kb on + strand, within AO353_15920 at 3513.376 kb on + strand, within AO353_15920 at 3513.377 kb on - strand, within AO353_15920 at 3513.377 kb on - strand, within AO353_15920 at 3513.377 kb on - strand, within AO353_15920 at 3513.503 kb on + strand, within AO353_15920 at 3513.504 kb on - strand, within AO353_15920 at 3513.504 kb on - strand, within AO353_15920 at 3513.504 kb on - strand, within AO353_15920 at 3513.504 kb on - strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.548 kb on + strand, within AO353_15920 at 3513.549 kb on - strand, within AO353_15920 at 3513.549 kb on - strand, within AO353_15920 at 3513.549 kb on - strand, within AO353_15920 at 3513.549 kb on - strand, within AO353_15920 at 3513.549 kb on - strand, within AO353_15920 at 3513.671 kb on + strand, within AO353_15920 at 3513.671 kb on + strand, within AO353_15920 at 3513.672 kb on - strand, within AO353_15920 at 3513.672 kb on - strand, within AO353_15920 at 3513.749 kb on + strand, within AO353_15920 at 3513.749 kb on + strand, within AO353_15920 at 3513.750 kb on - strand, within AO353_15920 at 3513.750 kb on - strand, within AO353_15920 at 3513.750 kb on - strand, within AO353_15920 at 3513.750 kb on - strand, within AO353_15920 at 3513.750 kb on - strand, within AO353_15920 at 3513.750 kb on - strand, within AO353_15920 at 3513.797 kb on + strand, within AO353_15920 at 3513.797 kb on + strand, within AO353_15920 at 3513.797 kb on + strand, within AO353_15920 at 3513.797 kb on + strand, within AO353_15920 at 3513.797 kb on + strand, within AO353_15920 at 3513.798 kb on - strand, within AO353_15920 at 3513.798 kb on - strand, within AO353_15920 at 3513.798 kb on - strand, within AO353_15920 at 3513.798 kb on - strand, within AO353_15920 at 3513.798 kb on - strand, within AO353_15920 at 3513.799 kb on + strand, within AO353_15920 at 3513.800 kb on - strand, within AO353_15920 at 3513.867 kb on + strand, within AO353_15920 at 3513.868 kb on - strand, within AO353_15920 at 3513.868 kb on - strand, within AO353_15920 at 3513.996 kb on + strand at 3513.997 kb on - strand at 3513.997 kb on - strand at 3514.053 kb on + strand at 3514.188 kb on + strand at 3514.188 kb on + strand at 3514.188 kb on + strand at 3514.188 kb on + strand at 3514.188 kb on + strand at 3514.189 kb on - strand at 3514.189 kb on - strand at 3514.189 kb on - strand at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.236 kb on + strand, within AO353_15925 at 3514.237 kb on - strand, within AO353_15925 at 3514.237 kb on - strand, within AO353_15925 at 3514.237 kb on - strand, within AO353_15925 at 3514.237 kb on - strand, within AO353_15925 at 3514.364 kb on - strand, within AO353_15925 at 3514.364 kb on - strand, within AO353_15925 at 3514.425 kb on + strand, within AO353_15925 at 3514.425 kb on + strand, within AO353_15925 at 3514.425 kb on + strand, within AO353_15925 at 3514.426 kb on - strand, within AO353_15925 at 3514.426 kb on - strand, within AO353_15925 at 3514.426 kb on - strand, within AO353_15925 at 3514.426 kb on - strand, within AO353_15925 at 3514.496 kb on + strand, within AO353_15925 at 3514.497 kb on - strand, within AO353_15925 at 3514.497 kb on - strand, within AO353_15925 at 3514.497 kb on - strand, within AO353_15925 at 3514.497 kb on - strand, within AO353_15925 at 3514.497 kb on - strand, within AO353_15925 at 3514.497 kb on - strand, within AO353_15925 at 3514.545 kb on + strand, within AO353_15925 at 3514.546 kb on - strand, within AO353_15925 at 3514.546 kb on - strand, within AO353_15925 at 3514.546 kb on - strand, within AO353_15925 at 3514.563 kb on + strand, within AO353_15925 at 3514.563 kb on + strand, within AO353_15925 at 3514.563 kb on + strand, within AO353_15925 at 3514.564 kb on - strand, within AO353_15925 at 3514.564 kb on - strand, within AO353_15925 at 3514.564 kb on - strand, within AO353_15925 at 3514.614 kb on + strand, within AO353_15925 at 3514.614 kb on + strand, within AO353_15925 at 3514.615 kb on - strand, within AO353_15925 at 3514.615 kb on - strand, within AO353_15925 at 3514.615 kb on - strand, within AO353_15925 at 3514.650 kb on + strand, within AO353_15925 at 3514.651 kb on - strand, within AO353_15925 at 3514.651 kb on - strand, within AO353_15925 at 3514.651 kb on - strand, within AO353_15925 at 3514.651 kb on - strand, within AO353_15925 at 3514.752 kb on + strand, within AO353_15925 at 3514.753 kb on - strand, within AO353_15925 at 3514.854 kb on + strand, within AO353_15925 at 3514.854 kb on + strand, within AO353_15925 at 3514.854 kb on + strand, within AO353_15925 at 3514.854 kb on + strand, within AO353_15925 at 3514.854 kb on + strand, within AO353_15925 at 3514.855 kb on - strand, within AO353_15925 at 3514.855 kb on - strand, within AO353_15925 at 3514.976 kb on - strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.061 kb on + strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.062 kb on - strand, within AO353_15925 at 3515.074 kb on + strand, within AO353_15925 at 3515.244 kb on + strand, within AO353_15925 at 3515.244 kb on + strand, within AO353_15925 at 3515.244 kb on + strand, within AO353_15925 at 3515.245 kb on - strand, within AO353_15925 at 3515.245 kb on - strand, within AO353_15925 at 3515.245 kb on - strand, within AO353_15925 at 3515.343 kb on + strand, within AO353_15925 at 3515.343 kb on + strand at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.344 kb on - strand, within AO353_15925 at 3515.431 kb on + strand, within AO353_15925 at 3515.700 kb on + strand at 3515.701 kb on - strand at 3515.701 kb on - strand at 3515.743 kb on + strand at 3515.743 kb on + strand at 3515.744 kb on - strand at 3515.796 kb on + strand at 3515.797 kb on - strand at 3516.006 kb on + strand at 3516.006 kb on + strand at 3516.007 kb on - strand at 3516.016 kb on + strand at 3516.048 kb on + strand at 3516.048 kb on + strand at 3516.048 kb on + strand at 3516.049 kb on - strand at 3516.093 kb on + strand at 3516.093 kb on + strand at 3516.093 kb on + strand at 3516.093 kb on + strand at 3516.093 kb on + strand at 3516.146 kb on + strand at 3516.156 kb on + strand at 3516.156 kb on + strand at 3516.156 kb on + strand at 3516.156 kb on + strand at 3516.156 kb on + strand at 3516.156 kb on + strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.157 kb on - strand at 3516.269 kb on + strand, within AO353_15930 at 3516.269 kb on + strand, within AO353_15930 at 3516.270 kb on - strand, within AO353_15930 at 3516.338 kb on - strand, within AO353_15930 at 3516.363 kb on - strand, within AO353_15930 at 3516.384 kb on + strand, within AO353_15930 at 3516.384 kb on + strand, within AO353_15930 at 3516.385 kb on - strand, within AO353_15930 at 3516.385 kb on - strand, within AO353_15930 at 3516.385 kb on - strand, within AO353_15930 at 3516.385 kb on - strand, within AO353_15930 at 3516.684 kb on + strand, within AO353_15930 at 3516.685 kb on - strand, within AO353_15930
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,513,082 - +1.7 3,513,166 + -0.9 3,513,166 + -0.6 3,513,166 + +0.5 3,513,166 + -1.1 3,513,166 + +0.5 3,513,166 + -1.1 3,513,166 + -1.0 3,513,167 - +0.1 3,513,167 - +1.1 3,513,167 - -1.8 3,513,167 - +3.0 3,513,167 - -1.8 3,513,376 + AO353_15920 0.26 -1.2 3,513,376 + AO353_15920 0.26 -0.5 3,513,377 - AO353_15920 0.27 -0.2 3,513,377 - AO353_15920 0.27 +0.6 3,513,377 - AO353_15920 0.27 +0.7 3,513,503 + AO353_15920 0.42 +1.0 3,513,504 - AO353_15920 0.43 +1.2 3,513,504 - AO353_15920 0.43 -1.5 3,513,504 - AO353_15920 0.43 -0.1 3,513,504 - AO353_15920 0.43 -1.4 3,513,548 + AO353_15920 0.48 +1.1 3,513,548 + AO353_15920 0.48 -0.2 3,513,548 + AO353_15920 0.48 -2.1 3,513,548 + AO353_15920 0.48 +0.5 3,513,548 + AO353_15920 0.48 -0.7 3,513,548 + AO353_15920 0.48 -0.6 3,513,548 + AO353_15920 0.48 -0.1 3,513,548 + AO353_15920 0.48 +2.1 3,513,549 - AO353_15920 0.48 +0.2 3,513,549 - AO353_15920 0.48 +0.3 3,513,549 - AO353_15920 0.48 +0.1 3,513,549 - AO353_15920 0.48 -0.4 3,513,549 - AO353_15920 0.48 -1.8 3,513,671 + AO353_15920 0.64 -2.4 3,513,671 + AO353_15920 0.64 -0.9 3,513,672 - AO353_15920 0.64 +0.1 3,513,672 - AO353_15920 0.64 -2.7 3,513,749 + AO353_15920 0.73 -1.8 3,513,749 + AO353_15920 0.73 -0.3 3,513,750 - AO353_15920 0.74 +0.4 3,513,750 - AO353_15920 0.74 +0.5 3,513,750 - AO353_15920 0.74 +0.4 3,513,750 - AO353_15920 0.74 -2.6 3,513,750 - AO353_15920 0.74 -0.5 3,513,750 - AO353_15920 0.74 -1.8 3,513,797 + AO353_15920 0.80 -0.9 3,513,797 + AO353_15920 0.80 -0.1 3,513,797 + AO353_15920 0.80 -0.7 3,513,797 + AO353_15920 0.80 -1.1 3,513,797 + AO353_15920 0.80 -1.4 3,513,798 - AO353_15920 0.80 -2.9 3,513,798 - AO353_15920 0.80 -1.6 3,513,798 - AO353_15920 0.80 -1.0 3,513,798 - AO353_15920 0.80 -1.6 3,513,798 - AO353_15920 0.80 -1.5 3,513,799 + AO353_15920 0.80 -0.2 3,513,800 - AO353_15920 0.80 -0.8 3,513,867 + AO353_15920 0.88 -1.0 3,513,868 - AO353_15920 0.89 -0.0 3,513,868 - AO353_15920 0.89 -1.9 3,513,996 + -0.8 3,513,997 - -1.1 3,513,997 - -0.7 3,514,053 + -0.7 3,514,188 + -1.3 3,514,188 + -2.6 3,514,188 + -1.7 3,514,188 + -0.8 3,514,188 + +1.1 3,514,189 - -3.0 3,514,189 - -4.1 3,514,189 - -2.6 3,514,236 + AO353_15925 0.11 -0.8 3,514,236 + AO353_15925 0.11 +0.1 3,514,236 + AO353_15925 0.11 -1.2 3,514,236 + AO353_15925 0.11 -0.3 3,514,236 + AO353_15925 0.11 -0.3 3,514,236 + AO353_15925 0.11 +0.9 3,514,236 + AO353_15925 0.11 +0.1 3,514,236 + AO353_15925 0.11 -0.9 3,514,237 - AO353_15925 0.11 +0.4 3,514,237 - AO353_15925 0.11 +0.1 3,514,237 - AO353_15925 0.11 -0.5 3,514,237 - AO353_15925 0.11 -1.8 3,514,364 - AO353_15925 0.19 +1.7 3,514,364 - AO353_15925 0.19 -0.3 3,514,425 + AO353_15925 0.22 +0.1 3,514,425 + AO353_15925 0.22 -1.6 3,514,425 + AO353_15925 0.22 -1.5 3,514,426 - AO353_15925 0.22 -1.4 3,514,426 - AO353_15925 0.22 -1.5 3,514,426 - AO353_15925 0.22 -1.5 3,514,426 - AO353_15925 0.22 -1.6 3,514,496 + AO353_15925 0.26 -2.4 3,514,497 - AO353_15925 0.26 -3.6 3,514,497 - AO353_15925 0.26 -0.9 3,514,497 - AO353_15925 0.26 +0.1 3,514,497 - AO353_15925 0.26 -1.3 3,514,497 - AO353_15925 0.26 -3.8 3,514,497 - AO353_15925 0.26 -1.6 3,514,545 + AO353_15925 0.29 -4.4 3,514,546 - AO353_15925 0.29 -2.2 3,514,546 - AO353_15925 0.29 -3.0 3,514,546 - AO353_15925 0.29 -2.2 3,514,563 + AO353_15925 0.30 -2.4 3,514,563 + AO353_15925 0.30 -0.6 3,514,563 + AO353_15925 0.30 -1.1 3,514,564 - AO353_15925 0.30 -1.5 3,514,564 - AO353_15925 0.30 -2.4 3,514,564 - AO353_15925 0.30 -3.0 3,514,614 + AO353_15925 0.33 -3.0 3,514,614 + AO353_15925 0.33 -1.3 3,514,615 - AO353_15925 0.34 -1.9 3,514,615 - AO353_15925 0.34 -1.8 3,514,615 - AO353_15925 0.34 -1.6 3,514,650 + AO353_15925 0.36 +0.4 3,514,651 - AO353_15925 0.36 -0.9 3,514,651 - AO353_15925 0.36 -2.1 3,514,651 - AO353_15925 0.36 -1.9 3,514,651 - AO353_15925 0.36 +0.7 3,514,752 + AO353_15925 0.42 -3.1 3,514,753 - AO353_15925 0.42 -2.9 3,514,854 + AO353_15925 0.48 -2.5 3,514,854 + AO353_15925 0.48 -2.9 3,514,854 + AO353_15925 0.48 -0.8 3,514,854 + AO353_15925 0.48 -2.0 3,514,854 + AO353_15925 0.48 -1.6 3,514,855 - AO353_15925 0.48 -1.5 3,514,855 - AO353_15925 0.48 -1.5 3,514,976 - AO353_15925 0.55 -1.3 3,515,061 + AO353_15925 0.60 -1.6 3,515,061 + AO353_15925 0.60 -3.5 3,515,061 + AO353_15925 0.60 -0.6 3,515,061 + AO353_15925 0.60 -3.3 3,515,061 + AO353_15925 0.60 -1.9 3,515,061 + AO353_15925 0.60 -1.3 3,515,061 + AO353_15925 0.60 -3.7 3,515,062 - AO353_15925 0.60 -1.5 3,515,062 - AO353_15925 0.60 -2.6 3,515,062 - AO353_15925 0.60 -0.6 3,515,062 - AO353_15925 0.60 -2.2 3,515,062 - AO353_15925 0.60 -2.7 3,515,062 - AO353_15925 0.60 -2.8 3,515,062 - AO353_15925 0.60 -1.7 3,515,062 - AO353_15925 0.60 -1.4 3,515,062 - AO353_15925 0.60 -2.2 3,515,062 - AO353_15925 0.60 -1.8 3,515,062 - AO353_15925 0.60 -1.6 3,515,074 + AO353_15925 0.61 -0.3 3,515,244 + AO353_15925 0.71 -1.3 3,515,244 + AO353_15925 0.71 -2.1 3,515,244 + AO353_15925 0.71 -0.3 3,515,245 - AO353_15925 0.71 -2.0 3,515,245 - AO353_15925 0.71 -3.1 3,515,245 - AO353_15925 0.71 -1.6 3,515,343 + AO353_15925 0.77 -3.1 3,515,343 + +0.7 3,515,344 - AO353_15925 0.77 -1.5 3,515,344 - AO353_15925 0.77 -2.6 3,515,344 - AO353_15925 0.77 +1.7 3,515,344 - AO353_15925 0.77 -1.3 3,515,344 - AO353_15925 0.77 -2.2 3,515,344 - AO353_15925 0.77 -1.9 3,515,344 - AO353_15925 0.77 -0.7 3,515,344 - AO353_15925 0.77 +0.6 3,515,431 + AO353_15925 0.82 -1.3 3,515,700 + -1.5 3,515,701 - -2.2 3,515,701 - -3.1 3,515,743 + -3.4 3,515,743 + -1.4 3,515,744 - -0.3 3,515,796 + -1.1 3,515,797 - -2.1 3,516,006 + +0.4 3,516,006 + -1.4 3,516,007 - -0.0 3,516,016 + +2.3 3,516,048 + -0.9 3,516,048 + +1.7 3,516,048 + +1.0 3,516,049 - +1.3 3,516,093 + +0.3 3,516,093 + +0.9 3,516,093 + +0.4 3,516,093 + -1.6 3,516,093 + +0.8 3,516,146 + -0.3 3,516,156 + -0.1 3,516,156 + +0.6 3,516,156 + +0.7 3,516,156 + +0.7 3,516,156 + -0.6 3,516,156 + -0.9 3,516,157 - -0.5 3,516,157 - -0.2 3,516,157 - +0.8 3,516,157 - +0.1 3,516,157 - +0.1 3,516,157 - -0.4 3,516,157 - +0.6 3,516,157 - -0.1 3,516,157 - -1.1 3,516,157 - -0.2 3,516,269 + AO353_15930 0.14 +0.1 3,516,269 + AO353_15930 0.14 +0.1 3,516,270 - AO353_15930 0.14 -0.7 3,516,338 - AO353_15930 0.22 +0.4 3,516,363 - AO353_15930 0.25 -0.0 3,516,384 + AO353_15930 0.28 -1.3 3,516,384 + AO353_15930 0.28 -1.4 3,516,385 - AO353_15930 0.28 +3.5 3,516,385 - AO353_15930 0.28 -1.8 3,516,385 - AO353_15930 0.28 +0.4 3,516,385 - AO353_15930 0.28 -0.4 3,516,684 + AO353_15930 0.64 +1.0 3,516,685 - AO353_15930 0.64 -0.4
Or see this region's nucleotide sequence