Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14795

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14785 and AO353_14790 are separated by 0 nucleotidesAO353_14790 and AO353_14795 overlap by 7 nucleotidesAO353_14795 and AO353_14800 overlap by 8 nucleotidesAO353_14800 and AO353_14805 are separated by 116 nucleotides AO353_14785: AO353_14785 - peptide chain release factor 1, at 3,274,809 to 3,275,891 _14785 AO353_14790: AO353_14790 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 3,275,892 to 3,276,722 _14790 AO353_14795: AO353_14795 - molybdopterin-synthase adenylyltransferase, at 3,276,716 to 3,277,471 _14795 AO353_14800: AO353_14800 - glutamate racemase, at 3,277,464 to 3,278,255 _14800 AO353_14805: AO353_14805 - lipid A 3-O-deacylase, at 3,278,372 to 3,278,890 _14805 Position (kb) 3276 3277 3278Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3275.881 kb on + strandat 3275.882 kb on - strandat 3275.889 kb on + strandat 3275.889 kb on + strandat 3275.889 kb on + strandat 3275.889 kb on + strandat 3275.889 kb on + strandat 3275.889 kb on + strandat 3275.889 kb on + strandat 3275.914 kb on + strandat 3275.914 kb on + strandat 3275.914 kb on + strandat 3276.098 kb on + strand, within AO353_14790at 3276.743 kb on + strandat 3276.745 kb on + strandat 3276.854 kb on + strand, within AO353_14795at 3277.000 kb on - strand, within AO353_14795at 3277.137 kb on + strand, within AO353_14795at 3277.137 kb on + strand, within AO353_14795at 3277.137 kb on + strand, within AO353_14795at 3277.138 kb on - strand, within AO353_14795at 3277.138 kb on - strand, within AO353_14795at 3277.138 kb on - strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3277.383 kb on + strand, within AO353_14795at 3278.201 kb on + strandat 3278.201 kb on + strandat 3278.201 kb on + strandat 3278.202 kb on - strandat 3278.202 kb on - strandat 3278.222 kb on + strandat 3278.223 kb on - strandat 3278.254 kb on - strandat 3278.254 kb on - strandat 3278.294 kb on + strandat 3278.294 kb on + strandat 3278.294 kb on + strandat 3278.295 kb on - strandat 3278.295 kb on - strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.314 kb on + strandat 3278.315 kb on - strandat 3278.315 kb on - strandat 3278.315 kb on - strandat 3278.315 kb on - strandat 3278.315 kb on - strandat 3278.315 kb on - strandat 3278.325 kb on + strandat 3278.325 kb on + strandat 3278.326 kb on - strandat 3278.326 kb on - strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.346 kb on + strandat 3278.347 kb on - strandat 3278.347 kb on - strandat 3278.347 kb on - strandat 3278.347 kb on - strandat 3278.347 kb on - strandat 3278.347 kb on - strandat 3278.347 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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3,275,881 + -1.4
3,275,882 - +0.5
3,275,889 + +0.7
3,275,889 + +1.3
3,275,889 + +0.4
3,275,889 + -0.4
3,275,889 + -0.9
3,275,889 + -1.0
3,275,889 + +0.2
3,275,914 + -0.2
3,275,914 + +0.1
3,275,914 + +0.3
3,276,098 + AO353_14790 0.25 -0.6
3,276,743 + -0.8
3,276,745 + -1.3
3,276,854 + AO353_14795 0.18 -0.3
3,277,000 - AO353_14795 0.38 -0.6
3,277,137 + AO353_14795 0.56 -0.1
3,277,137 + AO353_14795 0.56 -0.8
3,277,137 + AO353_14795 0.56 -0.5
3,277,138 - AO353_14795 0.56 +0.1
3,277,138 - AO353_14795 0.56 -0.6
3,277,138 - AO353_14795 0.56 -0.4
3,277,383 + AO353_14795 0.88 -2.2
3,277,383 + AO353_14795 0.88 -1.5
3,277,383 + AO353_14795 0.88 +0.1
3,277,383 + AO353_14795 0.88 -0.3
3,277,383 + AO353_14795 0.88 -0.1
3,277,383 + AO353_14795 0.88 -1.6
3,277,383 + AO353_14795 0.88 -2.3
3,277,383 + AO353_14795 0.88 -0.4
3,278,201 + -1.6
3,278,201 + -1.6
3,278,201 + -2.8
3,278,202 - -0.1
3,278,202 - -0.5
3,278,222 + -1.1
3,278,223 - +0.2
3,278,254 - +1.1
3,278,254 - -0.5
3,278,294 + -0.9
3,278,294 + -0.7
3,278,294 + +2.0
3,278,295 - -0.4
3,278,295 - +1.0
3,278,314 + +0.0
3,278,314 + +0.0
3,278,314 + +0.7
3,278,314 + +0.1
3,278,314 + +1.0
3,278,314 + +0.5
3,278,314 + +0.1
3,278,314 + +0.5
3,278,315 - +1.4
3,278,315 - +0.6
3,278,315 - -0.2
3,278,315 - +0.1
3,278,315 - -1.4
3,278,315 - -0.2
3,278,325 + -1.4
3,278,325 + +0.4
3,278,326 - +0.0
3,278,326 - -0.0
3,278,346 + -1.2
3,278,346 + -0.3
3,278,346 + -0.9
3,278,346 + +0.8
3,278,346 + +0.3
3,278,346 + +0.4
3,278,346 + -1.3
3,278,346 + -0.1
3,278,346 + -1.4
3,278,346 + -0.7
3,278,346 + +0.7
3,278,346 + -0.6
3,278,346 + -0.3
3,278,346 + -0.4
3,278,346 + +0.7
3,278,347 - +0.8
3,278,347 - -0.3
3,278,347 - -0.6
3,278,347 - +0.0
3,278,347 - +0.1
3,278,347 - +0.0
3,278,347 - -0.1

Or see this region's nucleotide sequence