Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14110 and AO353_14115 are separated by 123 nucleotides AO353_14115 and AO353_14120 are separated by 11 nucleotides AO353_14120 and AO353_14125 are separated by 120 nucleotides
AO353_14110: AO353_14110 - GTPase CgtA, at 3,134,515 to 3,135,738
_14110
AO353_14115: AO353_14115 - gamma-glutamyl kinase, at 3,135,862 to 3,136,980
_14115
AO353_14120: AO353_14120 - hypothetical protein, at 3,136,992 to 3,137,456
_14120
AO353_14125: AO353_14125 - 30S ribosomal protein S20, at 3,137,577 to 3,137,855
_14125
Position (kb)
3135
3136
3137 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3135.724 kb on + strand at 3135.724 kb on + strand at 3135.724 kb on + strand at 3135.725 kb on - strand at 3135.725 kb on - strand at 3135.749 kb on + strand at 3135.749 kb on + strand at 3135.750 kb on - strand at 3135.755 kb on + strand at 3135.756 kb on - strand at 3135.785 kb on + strand at 3135.786 kb on - strand at 3135.800 kb on - strand at 3135.809 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.848 kb on + strand at 3135.849 kb on - strand at 3135.849 kb on - strand at 3135.849 kb on - strand at 3136.041 kb on + strand, within AO353_14115 at 3136.041 kb on + strand, within AO353_14115 at 3136.041 kb on + strand, within AO353_14115 at 3136.041 kb on + strand, within AO353_14115 at 3136.042 kb on - strand, within AO353_14115 at 3136.042 kb on - strand, within AO353_14115 at 3136.284 kb on + strand, within AO353_14115 at 3136.439 kb on - strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.752 kb on + strand, within AO353_14115 at 3136.753 kb on - strand, within AO353_14115 at 3136.753 kb on - strand, within AO353_14115 at 3136.753 kb on - strand, within AO353_14115 at 3136.753 kb on - strand, within AO353_14115 at 3136.864 kb on + strand at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.864 kb on + strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.865 kb on - strand, within AO353_14115 at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.930 kb on + strand at 3136.931 kb on - strand at 3136.931 kb on - strand at 3136.931 kb on - strand at 3136.979 kb on - strand at 3136.979 kb on - strand at 3137.068 kb on + strand, within AO353_14120 at 3137.069 kb on - strand, within AO353_14120 at 3137.069 kb on - strand, within AO353_14120 at 3137.154 kb on + strand, within AO353_14120 at 3137.154 kb on + strand, within AO353_14120 at 3137.154 kb on + strand, within AO353_14120 at 3137.155 kb on - strand, within AO353_14120 at 3137.367 kb on + strand, within AO353_14120 at 3137.367 kb on + strand, within AO353_14120 at 3137.367 kb on + strand, within AO353_14120 at 3137.368 kb on - strand, within AO353_14120 at 3137.368 kb on - strand, within AO353_14120 at 3137.368 kb on - strand, within AO353_14120 at 3137.377 kb on - strand, within AO353_14120 at 3137.377 kb on - strand, within AO353_14120 at 3137.454 kb on + strand at 3137.454 kb on + strand at 3137.534 kb on + strand at 3137.972 kb on - strand at 3137.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,135,724 + -0.4 3,135,724 + -0.4 3,135,724 + -1.0 3,135,725 - +0.6 3,135,725 - +0.4 3,135,749 + -0.7 3,135,749 + +0.2 3,135,750 - +0.6 3,135,755 + -2.0 3,135,756 - +0.2 3,135,785 + +0.4 3,135,786 - -1.6 3,135,800 - -1.6 3,135,809 + -0.7 3,135,848 + +1.8 3,135,848 + -0.0 3,135,848 + +0.9 3,135,848 + -1.7 3,135,848 + -1.0 3,135,848 + +1.2 3,135,848 + -0.2 3,135,848 + +0.2 3,135,848 + +0.6 3,135,848 + -0.5 3,135,848 + +1.2 3,135,848 + +0.0 3,135,848 + -2.8 3,135,849 - -2.8 3,135,849 - -2.3 3,135,849 - -1.6 3,136,041 + AO353_14115 0.16 -0.8 3,136,041 + AO353_14115 0.16 -1.6 3,136,041 + AO353_14115 0.16 -0.6 3,136,041 + AO353_14115 0.16 -1.2 3,136,042 - AO353_14115 0.16 -1.7 3,136,042 - AO353_14115 0.16 -0.6 3,136,284 + AO353_14115 0.38 -1.0 3,136,439 - AO353_14115 0.52 -1.4 3,136,752 + AO353_14115 0.80 -2.0 3,136,752 + AO353_14115 0.80 +1.0 3,136,752 + AO353_14115 0.80 -1.4 3,136,752 + AO353_14115 0.80 -3.4 3,136,752 + AO353_14115 0.80 -3.7 3,136,752 + AO353_14115 0.80 -1.7 3,136,752 + AO353_14115 0.80 -0.6 3,136,753 - AO353_14115 0.80 -1.4 3,136,753 - AO353_14115 0.80 +3.3 3,136,753 - AO353_14115 0.80 -0.6 3,136,753 - AO353_14115 0.80 -1.7 3,136,864 + -0.2 3,136,864 + AO353_14115 0.90 -0.6 3,136,864 + AO353_14115 0.90 -1.2 3,136,864 + AO353_14115 0.90 -0.8 3,136,864 + AO353_14115 0.90 -0.6 3,136,864 + AO353_14115 0.90 -1.7 3,136,864 + AO353_14115 0.90 +0.8 3,136,864 + AO353_14115 0.90 -1.9 3,136,864 + AO353_14115 0.90 -2.0 3,136,864 + AO353_14115 0.90 -1.6 3,136,864 + AO353_14115 0.90 -0.2 3,136,864 + AO353_14115 0.90 -1.4 3,136,865 - AO353_14115 0.90 -0.8 3,136,865 - AO353_14115 0.90 -0.6 3,136,865 - AO353_14115 0.90 -0.2 3,136,865 - AO353_14115 0.90 +0.4 3,136,865 - AO353_14115 0.90 -1.4 3,136,865 - AO353_14115 0.90 -2.2 3,136,865 - AO353_14115 0.90 -1.6 3,136,865 - AO353_14115 0.90 -2.0 3,136,865 - AO353_14115 0.90 +0.2 3,136,865 - AO353_14115 0.90 -2.4 3,136,930 + +1.8 3,136,930 + -1.7 3,136,930 + -0.6 3,136,930 + -2.1 3,136,930 + -1.2 3,136,930 + -3.4 3,136,930 + -1.8 3,136,930 + -1.4 3,136,931 - -2.5 3,136,931 - -1.6 3,136,931 - -2.1 3,136,979 - +1.3 3,136,979 - -0.2 3,137,068 + AO353_14120 0.16 -0.6 3,137,069 - AO353_14120 0.17 -0.0 3,137,069 - AO353_14120 0.17 +0.2 3,137,154 + AO353_14120 0.35 -1.2 3,137,154 + AO353_14120 0.35 -0.0 3,137,154 + AO353_14120 0.35 -0.7 3,137,155 - AO353_14120 0.35 -0.5 3,137,367 + AO353_14120 0.81 +0.3 3,137,367 + AO353_14120 0.81 -0.6 3,137,367 + AO353_14120 0.81 +2.6 3,137,368 - AO353_14120 0.81 -1.3 3,137,368 - AO353_14120 0.81 -1.0 3,137,368 - AO353_14120 0.81 +0.4 3,137,377 - AO353_14120 0.83 -0.2 3,137,377 - AO353_14120 0.83 +1.1 3,137,454 + +0.3 3,137,454 + -0.2 3,137,534 + -1.0 3,137,972 - +0.2 3,137,972 - -0.4
Or see this region's nucleotide sequence