Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13160 and AO353_13165 are separated by 317 nucleotides AO353_13165 and AO353_13170 are separated by 54 nucleotides
AO353_13160: AO353_13160 - membrane protease HflC, at 2,916,425 to 2,917,294
_13160
AO353_13165: AO353_13165 - ATP phosphoribosyltransferase regulatory subunit, at 2,917,612 to 2,918,799
_13165
AO353_13170: AO353_13170 - adenylosuccinate synthetase, at 2,918,854 to 2,920,146
_13170
Position (kb)
2917
2918
2919 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2916.690 kb on - strand, within AO353_13160 at 2916.690 kb on - strand, within AO353_13160 at 2917.092 kb on - strand, within AO353_13160 at 2917.178 kb on + strand, within AO353_13160 at 2917.188 kb on - strand, within AO353_13160 at 2917.188 kb on - strand, within AO353_13160 at 2917.369 kb on + strand at 2917.369 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.531 kb on + strand at 2917.537 kb on + strand at 2917.537 kb on + strand at 2917.610 kb on + strand at 2917.658 kb on + strand at 2917.658 kb on + strand at 2917.658 kb on + strand at 2917.658 kb on + strand at 2917.658 kb on + strand at 2917.658 kb on + strand at 2917.729 kb on + strand at 2917.863 kb on + strand, within AO353_13165 at 2917.863 kb on + strand, within AO353_13165 at 2918.005 kb on + strand, within AO353_13165 at 2918.005 kb on + strand, within AO353_13165 at 2918.005 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.116 kb on + strand, within AO353_13165 at 2918.208 kb on + strand, within AO353_13165 at 2918.208 kb on + strand, within AO353_13165 at 2918.208 kb on + strand, within AO353_13165 at 2918.208 kb on + strand, within AO353_13165 at 2918.208 kb on + strand, within AO353_13165 at 2918.401 kb on + strand, within AO353_13165 at 2918.434 kb on + strand, within AO353_13165 at 2918.459 kb on + strand, within AO353_13165 at 2918.616 kb on + strand, within AO353_13165 at 2918.780 kb on + strand at 2918.780 kb on + strand at 2918.780 kb on + strand at 2918.780 kb on + strand at 2918.780 kb on + strand at 2918.780 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 2,916,690 - AO353_13160 0.30 +2.8 2,916,690 - AO353_13160 0.30 -0.2 2,917,092 - AO353_13160 0.77 -2.3 2,917,178 + AO353_13160 0.87 -1.0 2,917,188 - AO353_13160 0.88 -0.5 2,917,188 - AO353_13160 0.88 +3.8 2,917,369 + +0.4 2,917,369 + +0.0 2,917,531 + +1.1 2,917,531 + -0.3 2,917,531 + -0.5 2,917,531 + -0.2 2,917,531 + +0.2 2,917,531 + -1.4 2,917,531 + -0.3 2,917,531 + -1.4 2,917,531 + -1.3 2,917,531 + +0.4 2,917,531 + -0.0 2,917,537 + -0.2 2,917,537 + +0.8 2,917,610 + -1.4 2,917,658 + -1.2 2,917,658 + -1.0 2,917,658 + -2.3 2,917,658 + -3.2 2,917,658 + -2.4 2,917,658 + -0.5 2,917,729 + -2.8 2,917,863 + AO353_13165 0.21 -0.4 2,917,863 + AO353_13165 0.21 -0.2 2,918,005 + AO353_13165 0.33 -3.8 2,918,005 + AO353_13165 0.33 -2.2 2,918,005 + AO353_13165 0.33 -1.9 2,918,116 + AO353_13165 0.42 +1.8 2,918,116 + AO353_13165 0.42 -0.5 2,918,116 + AO353_13165 0.42 -1.9 2,918,116 + AO353_13165 0.42 -1.2 2,918,116 + AO353_13165 0.42 -3.3 2,918,116 + AO353_13165 0.42 -1.0 2,918,116 + AO353_13165 0.42 -1.4 2,918,208 + AO353_13165 0.50 -2.6 2,918,208 + AO353_13165 0.50 -1.0 2,918,208 + AO353_13165 0.50 -0.8 2,918,208 + AO353_13165 0.50 -2.4 2,918,208 + AO353_13165 0.50 -1.6 2,918,401 + AO353_13165 0.66 -1.2 2,918,434 + AO353_13165 0.69 -0.2 2,918,459 + AO353_13165 0.71 -2.4 2,918,616 + AO353_13165 0.85 -2.0 2,918,780 + -1.2 2,918,780 + -1.4 2,918,780 + -0.8 2,918,780 + +0.4 2,918,780 + +0.1 2,918,780 + -0.3
Or see this region's nucleotide sequence