Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12810 and AO353_12815 are separated by 460 nucleotides AO353_12815 and AO353_12820 are separated by 341 nucleotides
AO353_12810: AO353_12810 - L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) , at 2,822,314 to 2,826,267
_12810
AO353_12815: AO353_12815 - proline:sodium symporter PutP, at 2,826,728 to 2,828,212
_12815
AO353_12820: AO353_12820 - type IV secretion protein Rhs, at 2,828,554 to 2,830,566
_12820
Position (kb)
2826
2827
2828
2829 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2825.835 kb on + strand, within AO353_12810 at 2825.835 kb on + strand, within AO353_12810 at 2825.835 kb on + strand, within AO353_12810 at 2825.836 kb on - strand, within AO353_12810 at 2825.836 kb on - strand, within AO353_12810 at 2825.836 kb on - strand, within AO353_12810 at 2825.836 kb on - strand, within AO353_12810 at 2826.149 kb on + strand at 2826.150 kb on - strand at 2826.150 kb on - strand at 2826.268 kb on - strand at 2826.273 kb on + strand at 2826.321 kb on - strand at 2826.394 kb on + strand at 2826.554 kb on + strand at 2826.555 kb on - strand at 2826.632 kb on - strand at 2826.698 kb on + strand at 2826.702 kb on + strand at 2826.702 kb on + strand at 2826.703 kb on - strand at 2826.703 kb on - strand at 2826.703 kb on - strand at 2826.721 kb on + strand at 2826.721 kb on + strand at 2826.721 kb on + strand at 2826.722 kb on - strand at 2826.767 kb on + strand at 2826.767 kb on + strand at 2826.767 kb on + strand at 2826.767 kb on + strand at 2826.768 kb on - strand at 2826.768 kb on - strand at 2826.768 kb on - strand at 2826.830 kb on + strand at 2826.830 kb on + strand at 2826.831 kb on - strand at 2826.831 kb on - strand at 2826.831 kb on - strand at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.932 kb on + strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.933 kb on - strand, within AO353_12815 at 2826.986 kb on + strand, within AO353_12815 at 2826.987 kb on - strand, within AO353_12815 at 2827.145 kb on + strand, within AO353_12815 at 2827.145 kb on + strand, within AO353_12815 at 2827.145 kb on + strand, within AO353_12815 at 2827.145 kb on + strand, within AO353_12815 at 2827.146 kb on - strand, within AO353_12815 at 2827.146 kb on - strand, within AO353_12815 at 2827.146 kb on - strand, within AO353_12815 at 2827.146 kb on - strand, within AO353_12815 at 2827.206 kb on - strand, within AO353_12815 at 2827.206 kb on - strand, within AO353_12815 at 2827.247 kb on + strand, within AO353_12815 at 2827.248 kb on - strand, within AO353_12815 at 2827.248 kb on - strand, within AO353_12815 at 2827.248 kb on - strand, within AO353_12815 at 2827.248 kb on - strand, within AO353_12815 at 2827.248 kb on - strand, within AO353_12815 at 2827.469 kb on + strand, within AO353_12815 at 2827.469 kb on + strand, within AO353_12815 at 2827.610 kb on + strand, within AO353_12815 at 2827.610 kb on + strand, within AO353_12815 at 2827.610 kb on + strand, within AO353_12815 at 2827.610 kb on + strand, within AO353_12815 at 2827.610 kb on + strand, within AO353_12815 at 2827.611 kb on - strand, within AO353_12815 at 2827.611 kb on - strand, within AO353_12815 at 2827.611 kb on - strand, within AO353_12815 at 2827.748 kb on - strand, within AO353_12815 at 2827.799 kb on + strand, within AO353_12815 at 2827.799 kb on + strand, within AO353_12815 at 2827.799 kb on + strand, within AO353_12815 at 2827.799 kb on + strand, within AO353_12815 at 2827.799 kb on + strand, within AO353_12815 at 2827.800 kb on - strand, within AO353_12815 at 2827.800 kb on - strand, within AO353_12815 at 2827.800 kb on - strand, within AO353_12815 at 2827.816 kb on + strand, within AO353_12815 at 2827.817 kb on - strand, within AO353_12815 at 2827.934 kb on + strand, within AO353_12815 at 2827.934 kb on + strand, within AO353_12815 at 2827.935 kb on - strand, within AO353_12815 at 2827.935 kb on - strand, within AO353_12815 at 2827.935 kb on - strand, within AO353_12815 at 2827.935 kb on - strand, within AO353_12815 at 2827.935 kb on - strand, within AO353_12815 at 2827.974 kb on + strand, within AO353_12815 at 2827.974 kb on + strand, within AO353_12815 at 2827.974 kb on + strand, within AO353_12815 at 2827.975 kb on - strand, within AO353_12815 at 2827.975 kb on - strand, within AO353_12815 at 2827.986 kb on + strand, within AO353_12815 at 2828.084 kb on + strand at 2828.085 kb on - strand at 2828.085 kb on - strand at 2828.123 kb on - strand at 2828.123 kb on - strand at 2828.232 kb on - strand at 2828.232 kb on - strand at 2828.246 kb on + strand at 2828.247 kb on - strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.336 kb on + strand at 2828.337 kb on - strand at 2828.337 kb on - strand at 2828.337 kb on - strand at 2828.340 kb on + strand at 2828.340 kb on + strand at 2828.340 kb on + strand at 2828.340 kb on + strand at 2828.340 kb on + strand at 2828.340 kb on + strand at 2828.341 kb on - strand at 2828.341 kb on - strand at 2828.341 kb on - strand at 2828.341 kb on - strand at 2828.341 kb on - strand at 2828.341 kb on - strand at 2828.350 kb on - strand at 2828.350 kb on - strand at 2828.350 kb on - strand at 2828.350 kb on - strand at 2828.355 kb on + strand at 2828.355 kb on + strand at 2828.356 kb on - strand at 2828.356 kb on - strand at 2828.356 kb on - strand at 2828.421 kb on + strand at 2828.422 kb on - strand at 2828.422 kb on - strand at 2828.422 kb on - strand at 2828.424 kb on + strand at 2828.424 kb on + strand at 2828.424 kb on + strand at 2828.424 kb on + strand at 2828.424 kb on + strand at 2828.424 kb on + strand at 2828.425 kb on - strand at 2828.425 kb on - strand at 2828.425 kb on - strand at 2828.425 kb on - strand at 2828.425 kb on - strand at 2828.425 kb on - strand at 2828.425 kb on - strand at 2828.580 kb on + strand at 2828.659 kb on + strand at 2828.660 kb on - strand at 2828.719 kb on + strand at 2828.848 kb on + strand, within AO353_12820 at 2828.848 kb on + strand, within AO353_12820 at 2828.849 kb on - strand, within AO353_12820 at 2828.849 kb on - strand, within AO353_12820 at 2828.849 kb on - strand, within AO353_12820 at 2828.886 kb on + strand, within AO353_12820 at 2828.886 kb on + strand, within AO353_12820 at 2828.886 kb on + strand, within AO353_12820 at 2828.886 kb on + strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.887 kb on - strand, within AO353_12820 at 2828.954 kb on + strand, within AO353_12820 at 2828.955 kb on - strand, within AO353_12820 at 2828.955 kb on - strand, within AO353_12820 at 2828.971 kb on + strand, within AO353_12820 at 2828.971 kb on + strand, within AO353_12820 at 2828.971 kb on + strand, within AO353_12820 at 2828.972 kb on - strand, within AO353_12820 at 2828.972 kb on - strand, within AO353_12820 at 2828.987 kb on - strand, within AO353_12820 at 2829.021 kb on + strand, within AO353_12820 at 2829.055 kb on + strand, within AO353_12820 at 2829.055 kb on + strand, within AO353_12820 at 2829.142 kb on + strand, within AO353_12820 at 2829.143 kb on - strand, within AO353_12820 at 2829.143 kb on - strand, within AO353_12820 at 2829.143 kb on - strand, within AO353_12820 at 2829.143 kb on - strand, within AO353_12820
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 2,825,835 + AO353_12810 0.89 -0.7 2,825,835 + AO353_12810 0.89 -0.0 2,825,835 + AO353_12810 0.89 +1.8 2,825,836 - AO353_12810 0.89 -0.3 2,825,836 - AO353_12810 0.89 +0.1 2,825,836 - AO353_12810 0.89 +0.3 2,825,836 - AO353_12810 0.89 +0.4 2,826,149 + -1.3 2,826,150 - +0.7 2,826,150 - -0.5 2,826,268 - -0.3 2,826,273 + +0.5 2,826,321 - +0.3 2,826,394 + -1.7 2,826,554 + -1.6 2,826,555 - +0.6 2,826,632 - -0.1 2,826,698 + +0.8 2,826,702 + +0.8 2,826,702 + -0.3 2,826,703 - -1.9 2,826,703 - +0.4 2,826,703 - -1.4 2,826,721 + +0.1 2,826,721 + -0.2 2,826,721 + -0.2 2,826,722 - +0.8 2,826,767 + -2.4 2,826,767 + -1.6 2,826,767 + +0.7 2,826,767 + -0.2 2,826,768 - +0.3 2,826,768 - -0.2 2,826,768 - -2.7 2,826,830 + +0.2 2,826,830 + +1.0 2,826,831 - -0.6 2,826,831 - +1.1 2,826,831 - -0.8 2,826,932 + AO353_12815 0.14 +0.5 2,826,932 + AO353_12815 0.14 +0.5 2,826,932 + AO353_12815 0.14 +0.5 2,826,932 + AO353_12815 0.14 +0.8 2,826,932 + AO353_12815 0.14 +0.8 2,826,932 + AO353_12815 0.14 +0.5 2,826,932 + AO353_12815 0.14 -0.7 2,826,932 + AO353_12815 0.14 -0.4 2,826,932 + AO353_12815 0.14 +0.8 2,826,932 + AO353_12815 0.14 +0.2 2,826,932 + AO353_12815 0.14 +2.1 2,826,932 + AO353_12815 0.14 +0.5 2,826,932 + AO353_12815 0.14 +0.5 2,826,932 + AO353_12815 0.14 +1.3 2,826,932 + AO353_12815 0.14 +0.8 2,826,932 + AO353_12815 0.14 -0.4 2,826,932 + AO353_12815 0.14 -0.4 2,826,932 + AO353_12815 0.14 -0.2 2,826,932 + AO353_12815 0.14 +0.1 2,826,932 + AO353_12815 0.14 +0.0 2,826,932 + AO353_12815 0.14 -1.0 2,826,932 + AO353_12815 0.14 -0.1 2,826,933 - AO353_12815 0.14 -1.7 2,826,933 - AO353_12815 0.14 -0.3 2,826,933 - AO353_12815 0.14 +0.8 2,826,933 - AO353_12815 0.14 +1.5 2,826,933 - AO353_12815 0.14 +1.3 2,826,933 - AO353_12815 0.14 +2.4 2,826,933 - AO353_12815 0.14 -0.7 2,826,933 - AO353_12815 0.14 +1.4 2,826,933 - AO353_12815 0.14 +0.5 2,826,933 - AO353_12815 0.14 +1.2 2,826,933 - AO353_12815 0.14 +0.7 2,826,986 + AO353_12815 0.17 -0.7 2,826,987 - AO353_12815 0.17 -1.3 2,827,145 + AO353_12815 0.28 +0.3 2,827,145 + AO353_12815 0.28 +0.6 2,827,145 + AO353_12815 0.28 -0.4 2,827,145 + AO353_12815 0.28 +0.4 2,827,146 - AO353_12815 0.28 -0.1 2,827,146 - AO353_12815 0.28 +1.3 2,827,146 - AO353_12815 0.28 -0.6 2,827,146 - AO353_12815 0.28 +0.2 2,827,206 - AO353_12815 0.32 +0.8 2,827,206 - AO353_12815 0.32 +0.6 2,827,247 + AO353_12815 0.35 +0.5 2,827,248 - AO353_12815 0.35 +1.3 2,827,248 - AO353_12815 0.35 -0.3 2,827,248 - AO353_12815 0.35 +1.6 2,827,248 - AO353_12815 0.35 -0.6 2,827,248 - AO353_12815 0.35 +0.1 2,827,469 + AO353_12815 0.50 +0.6 2,827,469 + AO353_12815 0.50 +0.3 2,827,610 + AO353_12815 0.59 -0.2 2,827,610 + AO353_12815 0.59 -0.4 2,827,610 + AO353_12815 0.59 +0.8 2,827,610 + AO353_12815 0.59 -1.5 2,827,610 + AO353_12815 0.59 +0.5 2,827,611 - AO353_12815 0.59 -0.1 2,827,611 - AO353_12815 0.59 +0.2 2,827,611 - AO353_12815 0.59 +1.3 2,827,748 - AO353_12815 0.69 +0.7 2,827,799 + AO353_12815 0.72 +0.0 2,827,799 + AO353_12815 0.72 +0.8 2,827,799 + AO353_12815 0.72 +0.4 2,827,799 + AO353_12815 0.72 -0.8 2,827,799 + AO353_12815 0.72 +1.0 2,827,800 - AO353_12815 0.72 -0.2 2,827,800 - AO353_12815 0.72 -0.2 2,827,800 - AO353_12815 0.72 +1.6 2,827,816 + AO353_12815 0.73 -0.7 2,827,817 - AO353_12815 0.73 +0.3 2,827,934 + AO353_12815 0.81 -0.1 2,827,934 + AO353_12815 0.81 +0.7 2,827,935 - AO353_12815 0.81 +0.5 2,827,935 - AO353_12815 0.81 +0.8 2,827,935 - AO353_12815 0.81 +1.4 2,827,935 - AO353_12815 0.81 +0.6 2,827,935 - AO353_12815 0.81 +0.5 2,827,974 + AO353_12815 0.84 -1.5 2,827,974 + AO353_12815 0.84 +0.6 2,827,974 + AO353_12815 0.84 -0.3 2,827,975 - AO353_12815 0.84 +0.1 2,827,975 - AO353_12815 0.84 -0.2 2,827,986 + AO353_12815 0.85 +0.3 2,828,084 + +0.8 2,828,085 - +0.9 2,828,085 - +1.5 2,828,123 - +1.3 2,828,123 - +0.7 2,828,232 - +0.5 2,828,232 - +1.4 2,828,246 + +0.5 2,828,247 - -0.2 2,828,336 + +0.0 2,828,336 + -0.7 2,828,336 + -1.7 2,828,336 + +0.3 2,828,336 + +0.9 2,828,336 + -1.0 2,828,336 + -0.7 2,828,336 + +1.3 2,828,336 + -0.0 2,828,337 - -0.7 2,828,337 - -0.7 2,828,337 - +1.1 2,828,340 + +0.5 2,828,340 + -0.7 2,828,340 + +0.5 2,828,340 + +0.7 2,828,340 + +0.5 2,828,340 + -0.2 2,828,341 - +0.6 2,828,341 - +0.3 2,828,341 - +0.6 2,828,341 - +0.8 2,828,341 - -0.8 2,828,341 - -0.6 2,828,350 - +0.7 2,828,350 - +0.7 2,828,350 - +0.8 2,828,350 - -0.3 2,828,355 + -0.5 2,828,355 + +0.1 2,828,356 - +0.3 2,828,356 - -1.1 2,828,356 - -0.5 2,828,421 + -0.7 2,828,422 - -0.2 2,828,422 - +0.7 2,828,422 - -0.9 2,828,424 + -0.5 2,828,424 + +1.3 2,828,424 + +1.1 2,828,424 + +1.0 2,828,424 + +0.2 2,828,424 + -0.2 2,828,425 - +0.4 2,828,425 - -0.7 2,828,425 - +0.5 2,828,425 - +1.2 2,828,425 - -0.2 2,828,425 - +1.1 2,828,425 - +0.8 2,828,580 + -1.3 2,828,659 + +1.0 2,828,660 - -0.1 2,828,719 + +0.7 2,828,848 + AO353_12820 0.15 -2.3 2,828,848 + AO353_12820 0.15 +0.7 2,828,849 - AO353_12820 0.15 +0.3 2,828,849 - AO353_12820 0.15 +0.2 2,828,849 - AO353_12820 0.15 +0.2 2,828,886 + AO353_12820 0.16 -0.6 2,828,886 + AO353_12820 0.16 +1.0 2,828,886 + AO353_12820 0.16 -1.0 2,828,886 + AO353_12820 0.16 +1.4 2,828,887 - AO353_12820 0.17 +0.7 2,828,887 - AO353_12820 0.17 +0.6 2,828,887 - AO353_12820 0.17 -1.2 2,828,887 - AO353_12820 0.17 -0.1 2,828,887 - AO353_12820 0.17 +0.4 2,828,887 - AO353_12820 0.17 +0.8 2,828,887 - AO353_12820 0.17 -1.2 2,828,954 + AO353_12820 0.20 -0.1 2,828,955 - AO353_12820 0.20 +0.4 2,828,955 - AO353_12820 0.20 +1.1 2,828,971 + AO353_12820 0.21 +0.7 2,828,971 + AO353_12820 0.21 +1.3 2,828,971 + AO353_12820 0.21 +0.5 2,828,972 - AO353_12820 0.21 +0.3 2,828,972 - AO353_12820 0.21 +2.8 2,828,987 - AO353_12820 0.22 -0.1 2,829,021 + AO353_12820 0.23 +0.5 2,829,055 + AO353_12820 0.25 -0.7 2,829,055 + AO353_12820 0.25 +0.7 2,829,142 + AO353_12820 0.29 +0.2 2,829,143 - AO353_12820 0.29 -0.5 2,829,143 - AO353_12820 0.29 -1.9 2,829,143 - AO353_12820 0.29 +0.7 2,829,143 - AO353_12820 0.29 +0.5
Or see this region's nucleotide sequence