Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10430 and AO353_10435 are separated by 9 nucleotides AO353_10435 and AO353_10440 are separated by 18 nucleotides AO353_10440 and AO353_10445 overlap by 4 nucleotides
AO353_10430: AO353_10430 - chromosome partitioning protein ParB, at 2,284,695 to 2,285,567
_10430
AO353_10435: AO353_10435 - chromosome partitioning protein, at 2,285,577 to 2,286,374
_10435
AO353_10440: AO353_10440 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 2,286,393 to 2,287,037
_10440
AO353_10445: AO353_10445 - tRNA uridine 5-carboxymethylaminomethyl modification protein, at 2,287,034 to 2,288,932
_10445
Position (kb)
2286
2287
2288 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2285.422 kb on + strand, within AO353_10430 at 2285.422 kb on + strand, within AO353_10430 at 2285.422 kb on + strand, within AO353_10430 at 2285.422 kb on + strand, within AO353_10430 at 2285.422 kb on + strand, within AO353_10430 at 2285.422 kb on + strand, within AO353_10430 at 2285.423 kb on - strand, within AO353_10430 at 2285.423 kb on - strand, within AO353_10430 at 2285.423 kb on - strand, within AO353_10430 at 2285.423 kb on - strand, within AO353_10430 at 2285.423 kb on - strand, within AO353_10430 at 2285.578 kb on + strand at 2285.578 kb on + strand at 2285.578 kb on + strand at 2285.578 kb on + strand at 2285.578 kb on + strand at 2285.578 kb on + strand at 2285.579 kb on - strand at 2285.650 kb on + strand at 2285.651 kb on - strand at 2285.680 kb on + strand, within AO353_10435 at 2285.680 kb on + strand, within AO353_10435 at 2285.680 kb on + strand, within AO353_10435 at 2285.701 kb on + strand, within AO353_10435 at 2285.701 kb on + strand, within AO353_10435 at 2285.701 kb on + strand, within AO353_10435 at 2285.749 kb on + strand, within AO353_10435 at 2285.749 kb on + strand, within AO353_10435 at 2285.750 kb on - strand, within AO353_10435 at 2285.750 kb on - strand, within AO353_10435 at 2285.750 kb on - strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.818 kb on + strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.819 kb on - strand, within AO353_10435 at 2285.920 kb on + strand, within AO353_10435 at 2285.921 kb on - strand, within AO353_10435 at 2285.939 kb on + strand, within AO353_10435 at 2285.939 kb on + strand, within AO353_10435 at 2285.940 kb on - strand, within AO353_10435 at 2285.944 kb on - strand, within AO353_10435 at 2286.013 kb on + strand, within AO353_10435 at 2286.013 kb on + strand, within AO353_10435 at 2286.014 kb on - strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.019 kb on + strand, within AO353_10435 at 2286.020 kb on - strand, within AO353_10435 at 2286.020 kb on - strand, within AO353_10435 at 2286.020 kb on - strand, within AO353_10435 at 2286.193 kb on + strand, within AO353_10435 at 2286.193 kb on + strand, within AO353_10435 at 2286.194 kb on - strand, within AO353_10435 at 2286.363 kb on + strand at 2286.363 kb on + strand at 2286.363 kb on + strand at 2286.363 kb on + strand at 2286.364 kb on - strand at 2286.364 kb on - strand at 2286.364 kb on - strand at 2286.364 kb on - strand at 2286.364 kb on - strand at 2286.368 kb on + strand at 2286.411 kb on + strand at 2286.412 kb on - strand at 2286.606 kb on - strand, within AO353_10440 at 2286.606 kb on - strand, within AO353_10440 at 2286.606 kb on - strand, within AO353_10440 at 2286.656 kb on + strand, within AO353_10440 at 2286.657 kb on - strand, within AO353_10440 at 2286.774 kb on - strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.901 kb on + strand, within AO353_10440 at 2286.902 kb on - strand, within AO353_10440 at 2286.902 kb on - strand, within AO353_10440 at 2286.902 kb on - strand, within AO353_10440 at 2286.902 kb on - strand, within AO353_10440 at 2286.902 kb on - strand, within AO353_10440 at 2286.935 kb on - strand, within AO353_10440 at 2287.408 kb on - strand, within AO353_10445 at 2287.844 kb on - strand, within AO353_10445 at 2287.844 kb on - strand, within AO353_10445 at 2287.888 kb on - strand, within AO353_10445
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 2,285,422 + AO353_10430 0.83 -0.6 2,285,422 + AO353_10430 0.83 -2.0 2,285,422 + AO353_10430 0.83 +0.7 2,285,422 + AO353_10430 0.83 +1.7 2,285,422 + AO353_10430 0.83 -0.2 2,285,422 + AO353_10430 0.83 +1.4 2,285,423 - AO353_10430 0.83 -1.3 2,285,423 - AO353_10430 0.83 +0.4 2,285,423 - AO353_10430 0.83 +0.7 2,285,423 - AO353_10430 0.83 +2.0 2,285,423 - AO353_10430 0.83 +0.1 2,285,578 + -1.2 2,285,578 + +1.0 2,285,578 + -1.6 2,285,578 + -1.4 2,285,578 + -0.0 2,285,578 + -0.1 2,285,579 - -0.5 2,285,650 + -1.8 2,285,651 - -2.6 2,285,680 + AO353_10435 0.13 +0.5 2,285,680 + AO353_10435 0.13 -0.6 2,285,680 + AO353_10435 0.13 +0.4 2,285,701 + AO353_10435 0.16 -0.0 2,285,701 + AO353_10435 0.16 -0.3 2,285,701 + AO353_10435 0.16 +0.2 2,285,749 + AO353_10435 0.22 -0.0 2,285,749 + AO353_10435 0.22 -0.7 2,285,750 - AO353_10435 0.22 +0.2 2,285,750 - AO353_10435 0.22 -1.7 2,285,750 - AO353_10435 0.22 -0.8 2,285,818 + AO353_10435 0.30 -0.5 2,285,818 + AO353_10435 0.30 -0.9 2,285,818 + AO353_10435 0.30 -0.2 2,285,818 + AO353_10435 0.30 -0.6 2,285,818 + AO353_10435 0.30 +1.0 2,285,818 + AO353_10435 0.30 -0.5 2,285,818 + AO353_10435 0.30 +1.2 2,285,818 + AO353_10435 0.30 -0.5 2,285,818 + AO353_10435 0.30 +0.2 2,285,818 + AO353_10435 0.30 -0.5 2,285,818 + AO353_10435 0.30 -0.0 2,285,818 + AO353_10435 0.30 +0.7 2,285,818 + AO353_10435 0.30 +0.4 2,285,818 + AO353_10435 0.30 +1.3 2,285,818 + AO353_10435 0.30 +0.7 2,285,818 + AO353_10435 0.30 -0.7 2,285,818 + AO353_10435 0.30 -2.4 2,285,818 + AO353_10435 0.30 +0.2 2,285,818 + AO353_10435 0.30 -1.3 2,285,818 + AO353_10435 0.30 +0.6 2,285,818 + AO353_10435 0.30 -1.2 2,285,818 + AO353_10435 0.30 -1.5 2,285,818 + AO353_10435 0.30 -1.1 2,285,819 - AO353_10435 0.30 -0.8 2,285,819 - AO353_10435 0.30 -1.1 2,285,819 - AO353_10435 0.30 -1.5 2,285,819 - AO353_10435 0.30 -1.4 2,285,819 - AO353_10435 0.30 -0.1 2,285,819 - AO353_10435 0.30 -1.5 2,285,819 - AO353_10435 0.30 -1.0 2,285,819 - AO353_10435 0.30 -1.2 2,285,819 - AO353_10435 0.30 -0.0 2,285,819 - AO353_10435 0.30 -1.4 2,285,819 - AO353_10435 0.30 -0.8 2,285,819 - AO353_10435 0.30 -0.6 2,285,819 - AO353_10435 0.30 -1.8 2,285,819 - AO353_10435 0.30 -1.6 2,285,819 - AO353_10435 0.30 -1.0 2,285,920 + AO353_10435 0.43 -1.8 2,285,921 - AO353_10435 0.43 -1.2 2,285,939 + AO353_10435 0.45 -0.0 2,285,939 + AO353_10435 0.45 -0.0 2,285,940 - AO353_10435 0.45 +1.7 2,285,944 - AO353_10435 0.46 -1.7 2,286,013 + AO353_10435 0.55 -1.0 2,286,013 + AO353_10435 0.55 -0.5 2,286,014 - AO353_10435 0.55 +0.4 2,286,019 + AO353_10435 0.55 -1.5 2,286,019 + AO353_10435 0.55 -1.8 2,286,019 + AO353_10435 0.55 -0.8 2,286,019 + AO353_10435 0.55 -1.3 2,286,019 + AO353_10435 0.55 -2.7 2,286,019 + AO353_10435 0.55 -0.1 2,286,019 + AO353_10435 0.55 -0.6 2,286,019 + AO353_10435 0.55 +1.4 2,286,019 + AO353_10435 0.55 -0.0 2,286,020 - AO353_10435 0.56 +1.0 2,286,020 - AO353_10435 0.56 +0.2 2,286,020 - AO353_10435 0.56 -0.3 2,286,193 + AO353_10435 0.77 +1.3 2,286,193 + AO353_10435 0.77 -2.6 2,286,194 - AO353_10435 0.77 +1.2 2,286,363 + -0.5 2,286,363 + -2.8 2,286,363 + -0.7 2,286,363 + -0.4 2,286,364 - +2.4 2,286,364 - -1.7 2,286,364 - -1.2 2,286,364 - -0.6 2,286,364 - -1.9 2,286,368 + +0.2 2,286,411 + -1.0 2,286,412 - +0.5 2,286,606 - AO353_10440 0.33 -0.5 2,286,606 - AO353_10440 0.33 +0.1 2,286,606 - AO353_10440 0.33 -1.3 2,286,656 + AO353_10440 0.41 -0.6 2,286,657 - AO353_10440 0.41 -0.4 2,286,774 - AO353_10440 0.59 +1.0 2,286,901 + AO353_10440 0.79 -1.3 2,286,901 + AO353_10440 0.79 +0.2 2,286,901 + AO353_10440 0.79 -0.6 2,286,901 + AO353_10440 0.79 +1.0 2,286,901 + AO353_10440 0.79 -1.5 2,286,901 + AO353_10440 0.79 -0.8 2,286,901 + AO353_10440 0.79 -0.0 2,286,901 + AO353_10440 0.79 -1.5 2,286,901 + AO353_10440 0.79 +1.2 2,286,901 + AO353_10440 0.79 -1.2 2,286,901 + AO353_10440 0.79 -1.7 2,286,901 + AO353_10440 0.79 -1.7 2,286,902 - AO353_10440 0.79 +1.0 2,286,902 - AO353_10440 0.79 -1.8 2,286,902 - AO353_10440 0.79 -0.3 2,286,902 - AO353_10440 0.79 +0.4 2,286,902 - AO353_10440 0.79 -1.6 2,286,935 - AO353_10440 0.84 -1.7 2,287,408 - AO353_10445 0.20 +1.0 2,287,844 - AO353_10445 0.43 -0.3 2,287,844 - AO353_10445 0.43 -1.0 2,287,888 - AO353_10445 0.45 +1.2
Or see this region's nucleotide sequence