Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08260 and AO353_08265 overlap by 1 nucleotides AO353_08265 and AO353_08270 are separated by 72 nucleotides
AO353_08260: AO353_08260 - peptidase M16, at 1,815,922 to 1,817,412
_08260
AO353_08265: AO353_08265 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 1,817,412 to 1,818,029
_08265
AO353_08270: AO353_08270 - alpha/beta hydrolase, at 1,818,102 to 1,819,100
_08270
Position (kb)
1817
1818
1819 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1816.555 kb on + strand, within AO353_08260 at 1816.555 kb on + strand, within AO353_08260 at 1816.555 kb on + strand, within AO353_08260 at 1816.556 kb on - strand, within AO353_08260 at 1816.556 kb on - strand, within AO353_08260 at 1816.614 kb on + strand, within AO353_08260 at 1816.651 kb on + strand, within AO353_08260 at 1816.652 kb on - strand, within AO353_08260 at 1816.652 kb on - strand, within AO353_08260 at 1816.873 kb on + strand, within AO353_08260 at 1816.873 kb on + strand, within AO353_08260 at 1816.873 kb on + strand, within AO353_08260 at 1816.873 kb on + strand, within AO353_08260 at 1816.873 kb on + strand, within AO353_08260 at 1816.873 kb on + strand, within AO353_08260 at 1816.874 kb on - strand, within AO353_08260 at 1816.874 kb on - strand, within AO353_08260 at 1816.943 kb on + strand, within AO353_08260 at 1816.943 kb on + strand, within AO353_08260 at 1816.943 kb on + strand, within AO353_08260 at 1816.943 kb on + strand, within AO353_08260 at 1816.944 kb on - strand, within AO353_08260 at 1816.944 kb on - strand, within AO353_08260 at 1816.944 kb on - strand, within AO353_08260 at 1816.944 kb on - strand, within AO353_08260 at 1816.944 kb on - strand, within AO353_08260 at 1817.086 kb on + strand, within AO353_08260 at 1817.086 kb on + strand, within AO353_08260 at 1817.087 kb on - strand, within AO353_08260 at 1817.087 kb on - strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.209 kb on + strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.210 kb on - strand, within AO353_08260 at 1817.211 kb on + strand, within AO353_08260 at 1817.211 kb on + strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.212 kb on - strand, within AO353_08260 at 1817.227 kb on + strand, within AO353_08260 at 1817.227 kb on + strand, within AO353_08260 at 1817.227 kb on + strand, within AO353_08260 at 1817.228 kb on - strand, within AO353_08260 at 1817.228 kb on - strand, within AO353_08260 at 1817.228 kb on - strand, within AO353_08260 at 1817.228 kb on - strand, within AO353_08260 at 1817.228 kb on - strand, within AO353_08260 at 1817.411 kb on - strand at 1817.411 kb on - strand at 1817.448 kb on - strand at 1817.586 kb on + strand, within AO353_08265 at 1817.586 kb on + strand, within AO353_08265 at 1817.586 kb on + strand, within AO353_08265 at 1817.586 kb on + strand, within AO353_08265 at 1817.587 kb on - strand, within AO353_08265 at 1817.587 kb on - strand, within AO353_08265 at 1817.587 kb on - strand, within AO353_08265 at 1817.587 kb on - strand, within AO353_08265 at 1817.587 kb on - strand, within AO353_08265 at 1817.802 kb on + strand, within AO353_08265 at 1817.803 kb on - strand, within AO353_08265 at 1817.803 kb on - strand, within AO353_08265 at 1817.803 kb on - strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.863 kb on + strand, within AO353_08265 at 1817.864 kb on - strand, within AO353_08265 at 1817.864 kb on - strand, within AO353_08265 at 1817.864 kb on - strand, within AO353_08265 at 1817.864 kb on - strand, within AO353_08265 at 1817.864 kb on - strand, within AO353_08265 at 1817.904 kb on + strand, within AO353_08265 at 1817.904 kb on + strand, within AO353_08265 at 1817.905 kb on - strand, within AO353_08265 at 1817.905 kb on - strand, within AO353_08265 at 1817.905 kb on - strand, within AO353_08265 at 1817.989 kb on - strand at 1817.989 kb on - strand at 1817.991 kb on + strand at 1817.991 kb on + strand at 1817.992 kb on - strand at 1818.008 kb on + strand at 1818.009 kb on - strand at 1818.009 kb on - strand at 1818.107 kb on + strand at 1818.107 kb on + strand at 1818.107 kb on + strand at 1818.108 kb on - strand at 1818.108 kb on - strand at 1818.108 kb on - strand at 1818.108 kb on - strand at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.330 kb on + strand, within AO353_08270 at 1818.331 kb on - strand, within AO353_08270 at 1818.331 kb on - strand, within AO353_08270 at 1818.331 kb on - strand, within AO353_08270 at 1818.331 kb on - strand, within AO353_08270 at 1818.331 kb on - strand, within AO353_08270 at 1818.331 kb on - strand, within AO353_08270 at 1818.432 kb on + strand, within AO353_08270 at 1818.432 kb on + strand, within AO353_08270 at 1818.433 kb on - strand, within AO353_08270 at 1818.433 kb on - strand, within AO353_08270 at 1818.433 kb on - strand, within AO353_08270 at 1818.433 kb on - strand, within AO353_08270 at 1818.433 kb on - strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.660 kb on + strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.661 kb on - strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.693 kb on + strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.694 kb on - strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.849 kb on + strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.850 kb on - strand, within AO353_08270 at 1818.873 kb on + strand, within AO353_08270 at 1818.967 kb on + strand, within AO353_08270
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,816,555 + AO353_08260 0.42 -0.7 1,816,555 + AO353_08260 0.42 +1.5 1,816,555 + AO353_08260 0.42 +0.2 1,816,556 - AO353_08260 0.43 -0.2 1,816,556 - AO353_08260 0.43 +1.2 1,816,614 + AO353_08260 0.46 +0.7 1,816,651 + AO353_08260 0.49 -0.9 1,816,652 - AO353_08260 0.49 -1.3 1,816,652 - AO353_08260 0.49 +0.9 1,816,873 + AO353_08260 0.64 +0.1 1,816,873 + AO353_08260 0.64 +0.0 1,816,873 + AO353_08260 0.64 +0.8 1,816,873 + AO353_08260 0.64 +0.1 1,816,873 + AO353_08260 0.64 +0.2 1,816,873 + AO353_08260 0.64 +0.5 1,816,874 - AO353_08260 0.64 -0.7 1,816,874 - AO353_08260 0.64 +0.1 1,816,943 + AO353_08260 0.68 +1.7 1,816,943 + AO353_08260 0.68 +0.7 1,816,943 + AO353_08260 0.68 -0.2 1,816,943 + AO353_08260 0.68 +0.3 1,816,944 - AO353_08260 0.69 -1.6 1,816,944 - AO353_08260 0.69 -2.0 1,816,944 - AO353_08260 0.69 +0.9 1,816,944 - AO353_08260 0.69 -0.4 1,816,944 - AO353_08260 0.69 +0.0 1,817,086 + AO353_08260 0.78 -0.9 1,817,086 + AO353_08260 0.78 +1.3 1,817,087 - AO353_08260 0.78 -0.6 1,817,087 - AO353_08260 0.78 -1.7 1,817,209 + AO353_08260 0.86 -0.1 1,817,209 + AO353_08260 0.86 +0.9 1,817,209 + AO353_08260 0.86 +3.1 1,817,209 + AO353_08260 0.86 +0.4 1,817,209 + AO353_08260 0.86 +0.3 1,817,209 + AO353_08260 0.86 +0.1 1,817,209 + AO353_08260 0.86 -0.8 1,817,209 + AO353_08260 0.86 -0.1 1,817,210 - AO353_08260 0.86 -1.7 1,817,210 - AO353_08260 0.86 -1.7 1,817,210 - AO353_08260 0.86 -0.4 1,817,210 - AO353_08260 0.86 -1.4 1,817,210 - AO353_08260 0.86 +1.6 1,817,210 - AO353_08260 0.86 -1.1 1,817,210 - AO353_08260 0.86 +0.0 1,817,210 - AO353_08260 0.86 +0.9 1,817,211 + AO353_08260 0.86 +1.1 1,817,211 + AO353_08260 0.86 +0.9 1,817,212 - AO353_08260 0.87 +0.9 1,817,212 - AO353_08260 0.87 +0.9 1,817,212 - AO353_08260 0.87 -0.6 1,817,212 - AO353_08260 0.87 -1.4 1,817,212 - AO353_08260 0.87 -0.7 1,817,212 - AO353_08260 0.87 -0.9 1,817,212 - AO353_08260 0.87 -0.4 1,817,212 - AO353_08260 0.87 +0.9 1,817,227 + AO353_08260 0.88 -0.1 1,817,227 + AO353_08260 0.88 +0.8 1,817,227 + AO353_08260 0.88 -0.4 1,817,228 - AO353_08260 0.88 -1.6 1,817,228 - AO353_08260 0.88 -1.0 1,817,228 - AO353_08260 0.88 +2.6 1,817,228 - AO353_08260 0.88 -0.3 1,817,228 - AO353_08260 0.88 -0.7 1,817,411 - -0.7 1,817,411 - -2.1 1,817,448 - +0.3 1,817,586 + AO353_08265 0.28 -1.8 1,817,586 + AO353_08265 0.28 -1.3 1,817,586 + AO353_08265 0.28 -0.6 1,817,586 + AO353_08265 0.28 +0.4 1,817,587 - AO353_08265 0.28 +0.7 1,817,587 - AO353_08265 0.28 -1.8 1,817,587 - AO353_08265 0.28 -0.4 1,817,587 - AO353_08265 0.28 +1.0 1,817,587 - AO353_08265 0.28 +0.9 1,817,802 + AO353_08265 0.63 -0.1 1,817,803 - AO353_08265 0.63 -0.4 1,817,803 - AO353_08265 0.63 -0.4 1,817,803 - AO353_08265 0.63 +0.3 1,817,863 + AO353_08265 0.73 -0.5 1,817,863 + AO353_08265 0.73 +0.3 1,817,863 + AO353_08265 0.73 -1.8 1,817,863 + AO353_08265 0.73 -1.3 1,817,863 + AO353_08265 0.73 -0.1 1,817,863 + AO353_08265 0.73 -1.9 1,817,863 + AO353_08265 0.73 +0.5 1,817,864 - AO353_08265 0.73 +0.9 1,817,864 - AO353_08265 0.73 -0.4 1,817,864 - AO353_08265 0.73 -0.9 1,817,864 - AO353_08265 0.73 +0.3 1,817,864 - AO353_08265 0.73 -0.3 1,817,904 + AO353_08265 0.80 -2.0 1,817,904 + AO353_08265 0.80 -1.6 1,817,905 - AO353_08265 0.80 -1.2 1,817,905 - AO353_08265 0.80 -1.1 1,817,905 - AO353_08265 0.80 -1.1 1,817,989 - -1.3 1,817,989 - -0.9 1,817,991 + -1.4 1,817,991 + -0.1 1,817,992 - -1.3 1,818,008 + +0.9 1,818,009 - +0.6 1,818,009 - +0.8 1,818,107 + -0.8 1,818,107 + -0.3 1,818,107 + +0.2 1,818,108 - +0.9 1,818,108 - -0.8 1,818,108 - +0.6 1,818,108 - +1.9 1,818,330 + AO353_08270 0.23 -0.7 1,818,330 + AO353_08270 0.23 +0.9 1,818,330 + AO353_08270 0.23 +0.2 1,818,330 + AO353_08270 0.23 -1.0 1,818,330 + AO353_08270 0.23 -0.6 1,818,330 + AO353_08270 0.23 +0.0 1,818,330 + AO353_08270 0.23 +0.6 1,818,330 + AO353_08270 0.23 -0.1 1,818,330 + AO353_08270 0.23 +0.3 1,818,331 - AO353_08270 0.23 +1.2 1,818,331 - AO353_08270 0.23 +0.4 1,818,331 - AO353_08270 0.23 +0.5 1,818,331 - AO353_08270 0.23 -0.7 1,818,331 - AO353_08270 0.23 -0.9 1,818,331 - AO353_08270 0.23 -1.0 1,818,432 + AO353_08270 0.33 +0.8 1,818,432 + AO353_08270 0.33 +1.2 1,818,433 - AO353_08270 0.33 +0.7 1,818,433 - AO353_08270 0.33 +0.9 1,818,433 - AO353_08270 0.33 -0.2 1,818,433 - AO353_08270 0.33 +1.2 1,818,433 - AO353_08270 0.33 -1.3 1,818,660 + AO353_08270 0.56 -1.0 1,818,660 + AO353_08270 0.56 +0.1 1,818,660 + AO353_08270 0.56 +0.9 1,818,660 + AO353_08270 0.56 -1.7 1,818,660 + AO353_08270 0.56 -1.4 1,818,660 + AO353_08270 0.56 +0.2 1,818,660 + AO353_08270 0.56 +0.3 1,818,660 + AO353_08270 0.56 -0.4 1,818,660 + AO353_08270 0.56 -1.1 1,818,660 + AO353_08270 0.56 +0.3 1,818,660 + AO353_08270 0.56 -0.4 1,818,661 - AO353_08270 0.56 -0.4 1,818,661 - AO353_08270 0.56 +0.6 1,818,661 - AO353_08270 0.56 +0.7 1,818,661 - AO353_08270 0.56 +0.9 1,818,661 - AO353_08270 0.56 -0.4 1,818,661 - AO353_08270 0.56 -0.2 1,818,661 - AO353_08270 0.56 +1.9 1,818,661 - AO353_08270 0.56 -0.4 1,818,661 - AO353_08270 0.56 -0.8 1,818,661 - AO353_08270 0.56 +0.6 1,818,693 + AO353_08270 0.59 +0.3 1,818,693 + AO353_08270 0.59 +0.6 1,818,693 + AO353_08270 0.59 -0.1 1,818,693 + AO353_08270 0.59 +0.5 1,818,693 + AO353_08270 0.59 +0.4 1,818,693 + AO353_08270 0.59 -0.8 1,818,693 + AO353_08270 0.59 -1.0 1,818,693 + AO353_08270 0.59 -0.4 1,818,693 + AO353_08270 0.59 +1.2 1,818,693 + AO353_08270 0.59 -2.4 1,818,693 + AO353_08270 0.59 -0.1 1,818,694 - AO353_08270 0.59 -0.4 1,818,694 - AO353_08270 0.59 -0.0 1,818,694 - AO353_08270 0.59 -0.7 1,818,694 - AO353_08270 0.59 +1.2 1,818,694 - AO353_08270 0.59 -1.0 1,818,694 - AO353_08270 0.59 -1.2 1,818,694 - AO353_08270 0.59 -1.2 1,818,694 - AO353_08270 0.59 -0.8 1,818,694 - AO353_08270 0.59 +0.2 1,818,849 + AO353_08270 0.75 -0.3 1,818,849 + AO353_08270 0.75 +0.2 1,818,849 + AO353_08270 0.75 -1.2 1,818,849 + AO353_08270 0.75 +0.2 1,818,849 + AO353_08270 0.75 -2.4 1,818,849 + AO353_08270 0.75 +0.7 1,818,849 + AO353_08270 0.75 +0.4 1,818,849 + AO353_08270 0.75 +3.5 1,818,849 + AO353_08270 0.75 +0.1 1,818,849 + AO353_08270 0.75 +0.5 1,818,850 - AO353_08270 0.75 +0.3 1,818,850 - AO353_08270 0.75 -0.7 1,818,850 - AO353_08270 0.75 -0.1 1,818,850 - +0.9 1,818,850 - AO353_08270 0.75 +0.7 1,818,850 - AO353_08270 0.75 +0.4 1,818,850 - AO353_08270 0.75 -0.3 1,818,850 - AO353_08270 0.75 -0.1 1,818,850 - AO353_08270 0.75 -0.4 1,818,850 - AO353_08270 0.75 +1.5 1,818,873 + AO353_08270 0.77 +2.2 1,818,967 + AO353_08270 0.87 +0.4
Or see this region's nucleotide sequence