Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08265

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_08260 and AO353_08265 overlap by 1 nucleotidesAO353_08265 and AO353_08270 are separated by 72 nucleotides AO353_08260: AO353_08260 - peptidase M16, at 1,815,922 to 1,817,412 _08260 AO353_08265: AO353_08265 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 1,817,412 to 1,818,029 _08265 AO353_08270: AO353_08270 - alpha/beta hydrolase, at 1,818,102 to 1,819,100 _08270 Position (kb) 1817 1818 1819Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1816.555 kb on + strand, within AO353_08260at 1816.555 kb on + strand, within AO353_08260at 1816.555 kb on + strand, within AO353_08260at 1816.556 kb on - strand, within AO353_08260at 1816.556 kb on - strand, within AO353_08260at 1816.614 kb on + strand, within AO353_08260at 1816.651 kb on + strand, within AO353_08260at 1816.652 kb on - strand, within AO353_08260at 1816.652 kb on - strand, within AO353_08260at 1816.873 kb on + strand, within AO353_08260at 1816.873 kb on + strand, within AO353_08260at 1816.873 kb on + strand, within AO353_08260at 1816.873 kb on + strand, within AO353_08260at 1816.873 kb on + strand, within AO353_08260at 1816.873 kb on + strand, within AO353_08260at 1816.874 kb on - strand, within AO353_08260at 1816.874 kb on - strand, within AO353_08260at 1816.943 kb on + strand, within AO353_08260at 1816.943 kb on + strand, within AO353_08260at 1816.943 kb on + strand, within AO353_08260at 1816.943 kb on + strand, within AO353_08260at 1816.944 kb on - strand, within AO353_08260at 1816.944 kb on - strand, within AO353_08260at 1816.944 kb on - strand, within AO353_08260at 1816.944 kb on - strand, within AO353_08260at 1816.944 kb on - strand, within AO353_08260at 1817.086 kb on + strand, within AO353_08260at 1817.086 kb on + strand, within AO353_08260at 1817.087 kb on - strand, within AO353_08260at 1817.087 kb on - strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.209 kb on + strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.210 kb on - strand, within AO353_08260at 1817.211 kb on + strand, within AO353_08260at 1817.211 kb on + strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.212 kb on - strand, within AO353_08260at 1817.227 kb on + strand, within AO353_08260at 1817.227 kb on + strand, within AO353_08260at 1817.227 kb on + strand, within AO353_08260at 1817.228 kb on - strand, within AO353_08260at 1817.228 kb on - strand, within AO353_08260at 1817.228 kb on - strand, within AO353_08260at 1817.228 kb on - strand, within AO353_08260at 1817.228 kb on - strand, within AO353_08260at 1817.411 kb on - strandat 1817.411 kb on - strandat 1817.448 kb on - strandat 1817.586 kb on + strand, within AO353_08265at 1817.586 kb on + strand, within AO353_08265at 1817.586 kb on + strand, within AO353_08265at 1817.586 kb on + strand, within AO353_08265at 1817.587 kb on - strand, within AO353_08265at 1817.587 kb on - strand, within AO353_08265at 1817.587 kb on - strand, within AO353_08265at 1817.587 kb on - strand, within AO353_08265at 1817.587 kb on - strand, within AO353_08265at 1817.802 kb on + strand, within AO353_08265at 1817.803 kb on - strand, within AO353_08265at 1817.803 kb on - strand, within AO353_08265at 1817.803 kb on - strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.863 kb on + strand, within AO353_08265at 1817.864 kb on - strand, within AO353_08265at 1817.864 kb on - strand, within AO353_08265at 1817.864 kb on - strand, within AO353_08265at 1817.864 kb on - strand, within AO353_08265at 1817.864 kb on - strand, within AO353_08265at 1817.904 kb on + strand, within AO353_08265at 1817.904 kb on + strand, within AO353_08265at 1817.905 kb on - strand, within AO353_08265at 1817.905 kb on - strand, within AO353_08265at 1817.905 kb on - strand, within AO353_08265at 1817.989 kb on - strandat 1817.989 kb on - strandat 1817.991 kb on + strandat 1817.991 kb on + strandat 1817.992 kb on - strandat 1818.008 kb on + strandat 1818.009 kb on - strandat 1818.009 kb on - strandat 1818.107 kb on + strandat 1818.107 kb on + strandat 1818.107 kb on + strandat 1818.108 kb on - strandat 1818.108 kb on - strandat 1818.108 kb on - strandat 1818.108 kb on - strandat 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.330 kb on + strand, within AO353_08270at 1818.331 kb on - strand, within AO353_08270at 1818.331 kb on - strand, within AO353_08270at 1818.331 kb on - strand, within AO353_08270at 1818.331 kb on - strand, within AO353_08270at 1818.331 kb on - strand, within AO353_08270at 1818.331 kb on - strand, within AO353_08270at 1818.432 kb on + strand, within AO353_08270at 1818.432 kb on + strand, within AO353_08270at 1818.433 kb on - strand, within AO353_08270at 1818.433 kb on - strand, within AO353_08270at 1818.433 kb on - strand, within AO353_08270at 1818.433 kb on - strand, within AO353_08270at 1818.433 kb on - strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.660 kb on + strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.661 kb on - strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.693 kb on + strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.694 kb on - strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.849 kb on + strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strandat 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.850 kb on - strand, within AO353_08270at 1818.873 kb on + strand, within AO353_08270at 1818.967 kb on + strand, within AO353_08270

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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1,816,555 + AO353_08260 0.42 -0.7
1,816,555 + AO353_08260 0.42 +1.5
1,816,555 + AO353_08260 0.42 +0.2
1,816,556 - AO353_08260 0.43 -0.2
1,816,556 - AO353_08260 0.43 +1.2
1,816,614 + AO353_08260 0.46 +0.7
1,816,651 + AO353_08260 0.49 -0.9
1,816,652 - AO353_08260 0.49 -1.3
1,816,652 - AO353_08260 0.49 +0.9
1,816,873 + AO353_08260 0.64 +0.1
1,816,873 + AO353_08260 0.64 +0.0
1,816,873 + AO353_08260 0.64 +0.8
1,816,873 + AO353_08260 0.64 +0.1
1,816,873 + AO353_08260 0.64 +0.2
1,816,873 + AO353_08260 0.64 +0.5
1,816,874 - AO353_08260 0.64 -0.7
1,816,874 - AO353_08260 0.64 +0.1
1,816,943 + AO353_08260 0.68 +1.7
1,816,943 + AO353_08260 0.68 +0.7
1,816,943 + AO353_08260 0.68 -0.2
1,816,943 + AO353_08260 0.68 +0.3
1,816,944 - AO353_08260 0.69 -1.6
1,816,944 - AO353_08260 0.69 -2.0
1,816,944 - AO353_08260 0.69 +0.9
1,816,944 - AO353_08260 0.69 -0.4
1,816,944 - AO353_08260 0.69 +0.0
1,817,086 + AO353_08260 0.78 -0.9
1,817,086 + AO353_08260 0.78 +1.3
1,817,087 - AO353_08260 0.78 -0.6
1,817,087 - AO353_08260 0.78 -1.7
1,817,209 + AO353_08260 0.86 -0.1
1,817,209 + AO353_08260 0.86 +0.9
1,817,209 + AO353_08260 0.86 +3.1
1,817,209 + AO353_08260 0.86 +0.4
1,817,209 + AO353_08260 0.86 +0.3
1,817,209 + AO353_08260 0.86 +0.1
1,817,209 + AO353_08260 0.86 -0.8
1,817,209 + AO353_08260 0.86 -0.1
1,817,210 - AO353_08260 0.86 -1.7
1,817,210 - AO353_08260 0.86 -1.7
1,817,210 - AO353_08260 0.86 -0.4
1,817,210 - AO353_08260 0.86 -1.4
1,817,210 - AO353_08260 0.86 +1.6
1,817,210 - AO353_08260 0.86 -1.1
1,817,210 - AO353_08260 0.86 +0.0
1,817,210 - AO353_08260 0.86 +0.9
1,817,211 + AO353_08260 0.86 +1.1
1,817,211 + AO353_08260 0.86 +0.9
1,817,212 - AO353_08260 0.87 +0.9
1,817,212 - AO353_08260 0.87 +0.9
1,817,212 - AO353_08260 0.87 -0.6
1,817,212 - AO353_08260 0.87 -1.4
1,817,212 - AO353_08260 0.87 -0.7
1,817,212 - AO353_08260 0.87 -0.9
1,817,212 - AO353_08260 0.87 -0.4
1,817,212 - AO353_08260 0.87 +0.9
1,817,227 + AO353_08260 0.88 -0.1
1,817,227 + AO353_08260 0.88 +0.8
1,817,227 + AO353_08260 0.88 -0.4
1,817,228 - AO353_08260 0.88 -1.6
1,817,228 - AO353_08260 0.88 -1.0
1,817,228 - AO353_08260 0.88 +2.6
1,817,228 - AO353_08260 0.88 -0.3
1,817,228 - AO353_08260 0.88 -0.7
1,817,411 - -0.7
1,817,411 - -2.1
1,817,448 - +0.3
1,817,586 + AO353_08265 0.28 -1.8
1,817,586 + AO353_08265 0.28 -1.3
1,817,586 + AO353_08265 0.28 -0.6
1,817,586 + AO353_08265 0.28 +0.4
1,817,587 - AO353_08265 0.28 +0.7
1,817,587 - AO353_08265 0.28 -1.8
1,817,587 - AO353_08265 0.28 -0.4
1,817,587 - AO353_08265 0.28 +1.0
1,817,587 - AO353_08265 0.28 +0.9
1,817,802 + AO353_08265 0.63 -0.1
1,817,803 - AO353_08265 0.63 -0.4
1,817,803 - AO353_08265 0.63 -0.4
1,817,803 - AO353_08265 0.63 +0.3
1,817,863 + AO353_08265 0.73 -0.5
1,817,863 + AO353_08265 0.73 +0.3
1,817,863 + AO353_08265 0.73 -1.8
1,817,863 + AO353_08265 0.73 -1.3
1,817,863 + AO353_08265 0.73 -0.1
1,817,863 + AO353_08265 0.73 -1.9
1,817,863 + AO353_08265 0.73 +0.5
1,817,864 - AO353_08265 0.73 +0.9
1,817,864 - AO353_08265 0.73 -0.4
1,817,864 - AO353_08265 0.73 -0.9
1,817,864 - AO353_08265 0.73 +0.3
1,817,864 - AO353_08265 0.73 -0.3
1,817,904 + AO353_08265 0.80 -2.0
1,817,904 + AO353_08265 0.80 -1.6
1,817,905 - AO353_08265 0.80 -1.2
1,817,905 - AO353_08265 0.80 -1.1
1,817,905 - AO353_08265 0.80 -1.1
1,817,989 - -1.3
1,817,989 - -0.9
1,817,991 + -1.4
1,817,991 + -0.1
1,817,992 - -1.3
1,818,008 + +0.9
1,818,009 - +0.6
1,818,009 - +0.8
1,818,107 + -0.8
1,818,107 + -0.3
1,818,107 + +0.2
1,818,108 - +0.9
1,818,108 - -0.8
1,818,108 - +0.6
1,818,108 - +1.9
1,818,330 + AO353_08270 0.23 -0.7
1,818,330 + AO353_08270 0.23 +0.9
1,818,330 + AO353_08270 0.23 +0.2
1,818,330 + AO353_08270 0.23 -1.0
1,818,330 + AO353_08270 0.23 -0.6
1,818,330 + AO353_08270 0.23 +0.0
1,818,330 + AO353_08270 0.23 +0.6
1,818,330 + AO353_08270 0.23 -0.1
1,818,330 + AO353_08270 0.23 +0.3
1,818,331 - AO353_08270 0.23 +1.2
1,818,331 - AO353_08270 0.23 +0.4
1,818,331 - AO353_08270 0.23 +0.5
1,818,331 - AO353_08270 0.23 -0.7
1,818,331 - AO353_08270 0.23 -0.9
1,818,331 - AO353_08270 0.23 -1.0
1,818,432 + AO353_08270 0.33 +0.8
1,818,432 + AO353_08270 0.33 +1.2
1,818,433 - AO353_08270 0.33 +0.7
1,818,433 - AO353_08270 0.33 +0.9
1,818,433 - AO353_08270 0.33 -0.2
1,818,433 - AO353_08270 0.33 +1.2
1,818,433 - AO353_08270 0.33 -1.3
1,818,660 + AO353_08270 0.56 -1.0
1,818,660 + AO353_08270 0.56 +0.1
1,818,660 + AO353_08270 0.56 +0.9
1,818,660 + AO353_08270 0.56 -1.7
1,818,660 + AO353_08270 0.56 -1.4
1,818,660 + AO353_08270 0.56 +0.2
1,818,660 + AO353_08270 0.56 +0.3
1,818,660 + AO353_08270 0.56 -0.4
1,818,660 + AO353_08270 0.56 -1.1
1,818,660 + AO353_08270 0.56 +0.3
1,818,660 + AO353_08270 0.56 -0.4
1,818,661 - AO353_08270 0.56 -0.4
1,818,661 - AO353_08270 0.56 +0.6
1,818,661 - AO353_08270 0.56 +0.7
1,818,661 - AO353_08270 0.56 +0.9
1,818,661 - AO353_08270 0.56 -0.4
1,818,661 - AO353_08270 0.56 -0.2
1,818,661 - AO353_08270 0.56 +1.9
1,818,661 - AO353_08270 0.56 -0.4
1,818,661 - AO353_08270 0.56 -0.8
1,818,661 - AO353_08270 0.56 +0.6
1,818,693 + AO353_08270 0.59 +0.3
1,818,693 + AO353_08270 0.59 +0.6
1,818,693 + AO353_08270 0.59 -0.1
1,818,693 + AO353_08270 0.59 +0.5
1,818,693 + AO353_08270 0.59 +0.4
1,818,693 + AO353_08270 0.59 -0.8
1,818,693 + AO353_08270 0.59 -1.0
1,818,693 + AO353_08270 0.59 -0.4
1,818,693 + AO353_08270 0.59 +1.2
1,818,693 + AO353_08270 0.59 -2.4
1,818,693 + AO353_08270 0.59 -0.1
1,818,694 - AO353_08270 0.59 -0.4
1,818,694 - AO353_08270 0.59 -0.0
1,818,694 - AO353_08270 0.59 -0.7
1,818,694 - AO353_08270 0.59 +1.2
1,818,694 - AO353_08270 0.59 -1.0
1,818,694 - AO353_08270 0.59 -1.2
1,818,694 - AO353_08270 0.59 -1.2
1,818,694 - AO353_08270 0.59 -0.8
1,818,694 - AO353_08270 0.59 +0.2
1,818,849 + AO353_08270 0.75 -0.3
1,818,849 + AO353_08270 0.75 +0.2
1,818,849 + AO353_08270 0.75 -1.2
1,818,849 + AO353_08270 0.75 +0.2
1,818,849 + AO353_08270 0.75 -2.4
1,818,849 + AO353_08270 0.75 +0.7
1,818,849 + AO353_08270 0.75 +0.4
1,818,849 + AO353_08270 0.75 +3.5
1,818,849 + AO353_08270 0.75 +0.1
1,818,849 + AO353_08270 0.75 +0.5
1,818,850 - AO353_08270 0.75 +0.3
1,818,850 - AO353_08270 0.75 -0.7
1,818,850 - AO353_08270 0.75 -0.1
1,818,850 - +0.9
1,818,850 - AO353_08270 0.75 +0.7
1,818,850 - AO353_08270 0.75 +0.4
1,818,850 - AO353_08270 0.75 -0.3
1,818,850 - AO353_08270 0.75 -0.1
1,818,850 - AO353_08270 0.75 -0.4
1,818,850 - AO353_08270 0.75 +1.5
1,818,873 + AO353_08270 0.77 +2.2
1,818,967 + AO353_08270 0.87 +0.4

Or see this region's nucleotide sequence