Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07220

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_07215 and AO353_07220 are separated by 9 nucleotidesAO353_07220 and AO353_07225 are separated by 400 nucleotides AO353_07215: AO353_07215 - anthranilate phosphoribosyltransferase, at 1,582,162 to 1,583,211 _07215 AO353_07220: AO353_07220 - anthranilate synthase, at 1,583,221 to 1,583,814 _07220 AO353_07225: AO353_07225 - esterase, at 1,584,215 to 1,586,125 _07225 Position (kb) 1583 1584Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1582.298 kb on + strand, within AO353_07215at 1582.298 kb on + strand, within AO353_07215at 1582.299 kb on - strand, within AO353_07215at 1582.299 kb on - strand, within AO353_07215at 1582.299 kb on - strand, within AO353_07215at 1582.299 kb on - strand, within AO353_07215at 1582.299 kb on - strand, within AO353_07215at 1582.469 kb on + strand, within AO353_07215at 1582.470 kb on - strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.689 kb on + strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.690 kb on - strand, within AO353_07215at 1582.817 kb on + strand, within AO353_07215at 1582.817 kb on + strand, within AO353_07215at 1582.817 kb on + strand, within AO353_07215at 1582.817 kb on + strand, within AO353_07215at 1582.818 kb on - strand, within AO353_07215at 1582.818 kb on - strand, within AO353_07215at 1582.818 kb on - strand, within AO353_07215at 1582.972 kb on + strand, within AO353_07215at 1582.972 kb on + strand, within AO353_07215at 1582.972 kb on + strand, within AO353_07215at 1582.972 kb on + strand, within AO353_07215at 1583.503 kb on - strand, within AO353_07220at 1583.508 kb on + strand, within AO353_07220at 1583.508 kb on + strand, within AO353_07220at 1583.509 kb on - strand, within AO353_07220at 1583.517 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.536 kb on + strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.537 kb on - strand, within AO353_07220at 1583.612 kb on + strand, within AO353_07220at 1583.612 kb on + strand, within AO353_07220at 1583.612 kb on + strand, within AO353_07220at 1583.612 kb on + strand, within AO353_07220at 1583.612 kb on + strand, within AO353_07220at 1583.613 kb on - strand, within AO353_07220at 1583.749 kb on + strand, within AO353_07220at 1583.749 kb on + strand, within AO353_07220at 1583.749 kb on + strand, within AO353_07220at 1583.750 kb on - strand, within AO353_07220at 1583.750 kb on - strand, within AO353_07220at 1583.762 kb on + strandat 1583.763 kb on - strandat 1583.763 kb on - strandat 1583.763 kb on - strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.777 kb on + strandat 1583.778 kb on - strandat 1583.778 kb on - strandat 1583.781 kb on + strandat 1583.781 kb on + strandat 1583.782 kb on - strandat 1583.782 kb on - strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.792 kb on + strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.793 kb on - strandat 1583.797 kb on - strandat 1583.866 kb on + strandat 1583.928 kb on + strandat 1584.067 kb on + strandat 1584.067 kb on + strandat 1584.067 kb on + strandat 1584.067 kb on + strandat 1584.067 kb on + strandat 1584.067 kb on + strandat 1584.068 kb on - strandat 1584.068 kb on - strandat 1584.068 kb on - strandat 1584.068 kb on - strandat 1584.082 kb on + strandat 1584.083 kb on - strandat 1584.083 kb on - strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.087 kb on + strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.088 kb on - strandat 1584.107 kb on + strandat 1584.108 kb on - strandat 1584.108 kb on - strandat 1584.146 kb on - strandat 1584.146 kb on - strandat 1584.146 kb on - strandat 1584.146 kb on - strandat 1584.146 kb on - strandat 1584.149 kb on + strandat 1584.149 kb on + strandat 1584.149 kb on + strandat 1584.149 kb on + strandat 1584.150 kb on - strandat 1584.150 kb on - strandat 1584.150 kb on - strandat 1584.187 kb on + strandat 1584.187 kb on + strandat 1584.188 kb on - strandat 1584.188 kb on - strandat 1584.195 kb on + strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.196 kb on - strandat 1584.200 kb on + strandat 1584.200 kb on + strandat 1584.201 kb on - strandat 1584.299 kb on + strandat 1584.300 kb on - strandat 1584.301 kb on + strandat 1584.302 kb on - strandat 1584.410 kb on + strand, within AO353_07225at 1584.410 kb on + strand, within AO353_07225at 1584.410 kb on + strand, within AO353_07225at 1584.410 kb on + strand, within AO353_07225at 1584.410 kb on + strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.411 kb on - strand, within AO353_07225at 1584.456 kb on + strand, within AO353_07225at 1584.457 kb on - strand, within AO353_07225at 1584.555 kb on + strand, within AO353_07225at 1584.556 kb on - strand, within AO353_07225at 1584.632 kb on + strand, within AO353_07225at 1584.632 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.674 kb on + strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.675 kb on - strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.677 kb on + strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.678 kb on - strand, within AO353_07225at 1584.797 kb on + strand, within AO353_07225at 1584.797 kb on + strand, within AO353_07225at 1584.797 kb on + strand, within AO353_07225at 1584.797 kb on + strand, within AO353_07225at 1584.797 kb on + strand, within AO353_07225at 1584.797 kb on + strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225at 1584.798 kb on - strand, within AO353_07225

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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1,582,298 + AO353_07215 0.13 +0.8
1,582,298 + AO353_07215 0.13 -1.4
1,582,299 - AO353_07215 0.13 +0.2
1,582,299 - AO353_07215 0.13 -0.2
1,582,299 - AO353_07215 0.13 -0.8
1,582,299 - AO353_07215 0.13 -0.5
1,582,299 - AO353_07215 0.13 -0.5
1,582,469 + AO353_07215 0.29 -2.0
1,582,470 - AO353_07215 0.29 -1.5
1,582,689 + AO353_07215 0.50 -1.4
1,582,689 + AO353_07215 0.50 -1.7
1,582,689 + AO353_07215 0.50 -2.9
1,582,689 + AO353_07215 0.50 -2.8
1,582,689 + AO353_07215 0.50 -1.6
1,582,689 + AO353_07215 0.50 -2.4
1,582,689 + AO353_07215 0.50 -2.9
1,582,690 - AO353_07215 0.50 -2.8
1,582,690 - AO353_07215 0.50 -1.6
1,582,690 - AO353_07215 0.50 -1.4
1,582,690 - AO353_07215 0.50 -1.6
1,582,690 - AO353_07215 0.50 -0.6
1,582,690 - AO353_07215 0.50 +0.4
1,582,690 - AO353_07215 0.50 -0.2
1,582,690 - AO353_07215 0.50 -2.0
1,582,690 - AO353_07215 0.50 -2.8
1,582,690 - AO353_07215 0.50 -1.9
1,582,690 - AO353_07215 0.50 -1.3
1,582,690 - AO353_07215 0.50 -0.8
1,582,817 + AO353_07215 0.62 -1.4
1,582,817 + AO353_07215 0.62 -1.2
1,582,817 + AO353_07215 0.62 -0.9
1,582,817 + AO353_07215 0.62 -0.5
1,582,818 - AO353_07215 0.62 +0.8
1,582,818 - AO353_07215 0.62 -1.6
1,582,818 - AO353_07215 0.62 +0.8
1,582,972 + AO353_07215 0.77 -2.0
1,582,972 + AO353_07215 0.77 +0.2
1,582,972 + AO353_07215 0.77 -1.4
1,582,972 + AO353_07215 0.77 -1.5
1,583,503 - AO353_07220 0.47 -3.1
1,583,508 + AO353_07220 0.48 +0.1
1,583,508 + AO353_07220 0.48 -4.2
1,583,509 - AO353_07220 0.48 -2.6
1,583,517 + AO353_07220 0.50 -3.1
1,583,536 + AO353_07220 0.53 -1.9
1,583,536 + AO353_07220 0.53 -2.3
1,583,536 + AO353_07220 0.53 -1.0
1,583,536 + AO353_07220 0.53 -1.0
1,583,536 + AO353_07220 0.53 -1.9
1,583,536 + AO353_07220 0.53 -2.6
1,583,536 + AO353_07220 0.53 -1.5
1,583,536 + AO353_07220 0.53 -3.2
1,583,536 + AO353_07220 0.53 -1.4
1,583,536 + AO353_07220 0.53 -1.6
1,583,537 - AO353_07220 0.53 -1.4
1,583,537 - AO353_07220 0.53 -0.2
1,583,537 - AO353_07220 0.53 +0.2
1,583,537 - AO353_07220 0.53 -0.5
1,583,537 - AO353_07220 0.53 -2.4
1,583,537 - AO353_07220 0.53 -2.0
1,583,537 - AO353_07220 0.53 -1.6
1,583,537 - AO353_07220 0.53 -2.6
1,583,612 + AO353_07220 0.66 -1.0
1,583,612 + AO353_07220 0.66 -3.2
1,583,612 + AO353_07220 0.66 -2.0
1,583,612 + AO353_07220 0.66 -1.6
1,583,612 + AO353_07220 0.66 -0.8
1,583,613 - AO353_07220 0.66 -2.2
1,583,749 + AO353_07220 0.89 -0.5
1,583,749 + AO353_07220 0.89 -2.7
1,583,749 + AO353_07220 0.89 -2.1
1,583,750 - AO353_07220 0.89 -0.8
1,583,750 - AO353_07220 0.89 -2.9
1,583,762 + -4.6
1,583,763 - -0.2
1,583,763 - -2.2
1,583,763 - -2.9
1,583,777 + -1.6
1,583,777 + +0.0
1,583,777 + -3.0
1,583,777 + -1.2
1,583,777 + -1.2
1,583,777 + -0.8
1,583,777 + -1.6
1,583,777 + -1.9
1,583,778 - -0.8
1,583,778 - -2.0
1,583,781 + -1.4
1,583,781 + -1.9
1,583,782 - -2.4
1,583,782 - -3.2
1,583,792 + -2.6
1,583,792 + -0.3
1,583,792 + -2.0
1,583,792 + -1.0
1,583,792 + -2.4
1,583,792 + -1.4
1,583,792 + -3.7
1,583,792 + -2.5
1,583,793 - -3.5
1,583,793 - -2.1
1,583,793 - -3.6
1,583,793 - -3.4
1,583,793 - -1.6
1,583,793 - +0.0
1,583,793 - -2.9
1,583,793 - -2.5
1,583,793 - -4.0
1,583,797 - -1.0
1,583,866 + -0.8
1,583,928 + -2.1
1,584,067 + -2.3
1,584,067 + -1.7
1,584,067 + -3.8
1,584,067 + -3.4
1,584,067 + -2.6
1,584,067 + -2.2
1,584,068 - -1.8
1,584,068 - +1.5
1,584,068 - -0.1
1,584,068 - -0.9
1,584,082 + -2.7
1,584,083 - -0.3
1,584,083 - +1.4
1,584,087 + -1.4
1,584,087 + -2.5
1,584,087 + -2.1
1,584,087 + -2.5
1,584,087 + -2.9
1,584,087 + -1.6
1,584,087 + -1.2
1,584,087 + -1.4
1,584,087 + -1.7
1,584,087 + -2.1
1,584,088 - -1.0
1,584,088 - +0.4
1,584,088 - +0.0
1,584,088 - -2.4
1,584,088 - +0.1
1,584,088 - -0.5
1,584,088 - +0.1
1,584,088 - -0.5
1,584,088 - +0.6
1,584,107 + +0.2
1,584,108 - +0.5
1,584,108 - -0.5
1,584,146 - +1.2
1,584,146 - -0.0
1,584,146 - +1.6
1,584,146 - -0.4
1,584,146 - +0.0
1,584,149 + -1.2
1,584,149 + -1.1
1,584,149 + -0.4
1,584,149 + -1.0
1,584,150 - -0.4
1,584,150 - +1.8
1,584,150 - -1.2
1,584,187 + -2.3
1,584,187 + +0.6
1,584,188 - -0.1
1,584,188 - +1.8
1,584,195 + +0.8
1,584,196 - +0.6
1,584,196 - +0.6
1,584,196 - -2.0
1,584,196 - +1.4
1,584,196 - +1.4
1,584,196 - -0.2
1,584,196 - +0.2
1,584,196 - -0.3
1,584,200 + +0.3
1,584,200 + +0.8
1,584,201 - +0.8
1,584,299 + +1.3
1,584,300 - -0.8
1,584,301 + -0.1
1,584,302 - +1.0
1,584,410 + AO353_07225 0.10 -1.6
1,584,410 + AO353_07225 0.10 -0.8
1,584,410 + AO353_07225 0.10 +0.1
1,584,410 + AO353_07225 0.10 +0.4
1,584,410 + AO353_07225 0.10 -0.5
1,584,411 - AO353_07225 0.10 -0.2
1,584,411 - AO353_07225 0.10 -0.5
1,584,411 - AO353_07225 0.10 +0.8
1,584,411 - AO353_07225 0.10 +1.1
1,584,411 - AO353_07225 0.10 -0.4
1,584,411 - AO353_07225 0.10 +0.4
1,584,411 - AO353_07225 0.10 -0.2
1,584,456 + AO353_07225 0.13 +0.4
1,584,457 - AO353_07225 0.13 +0.5
1,584,555 + AO353_07225 0.18 +1.2
1,584,556 - AO353_07225 0.18 -0.8
1,584,632 + AO353_07225 0.22 +1.1
1,584,632 + AO353_07225 0.22 -0.1
1,584,674 + AO353_07225 0.24 +2.5
1,584,674 + AO353_07225 0.24 -0.1
1,584,674 + AO353_07225 0.24 -0.4
1,584,674 + AO353_07225 0.24 +0.1
1,584,674 + AO353_07225 0.24 -0.2
1,584,674 + AO353_07225 0.24 +1.0
1,584,674 + AO353_07225 0.24 -0.1
1,584,674 + AO353_07225 0.24 +1.2
1,584,675 - AO353_07225 0.24 -1.4
1,584,675 - AO353_07225 0.24 -1.0
1,584,675 - AO353_07225 0.24 +0.8
1,584,675 - AO353_07225 0.24 -1.5
1,584,675 - AO353_07225 0.24 +1.5
1,584,675 - AO353_07225 0.24 +1.2
1,584,675 - AO353_07225 0.24 -0.2
1,584,677 + AO353_07225 0.24 -0.4
1,584,677 + AO353_07225 0.24 -0.1
1,584,677 + AO353_07225 0.24 -2.4
1,584,677 + AO353_07225 0.24 +0.3
1,584,677 + AO353_07225 0.24 -0.2
1,584,677 + AO353_07225 0.24 +1.5
1,584,677 + AO353_07225 0.24 -0.6
1,584,677 + AO353_07225 0.24 +0.2
1,584,677 + AO353_07225 0.24 -0.2
1,584,677 + AO353_07225 0.24 +0.0
1,584,677 + AO353_07225 0.24 +0.1
1,584,678 - AO353_07225 0.24 -0.4
1,584,678 - AO353_07225 0.24 +0.0
1,584,678 - AO353_07225 0.24 -0.6
1,584,678 - AO353_07225 0.24 -0.9
1,584,678 - AO353_07225 0.24 -0.4
1,584,678 - AO353_07225 0.24 -0.8
1,584,678 - AO353_07225 0.24 +0.8
1,584,678 - AO353_07225 0.24 -0.4
1,584,678 - AO353_07225 0.24 +0.4
1,584,797 + AO353_07225 0.30 +0.6
1,584,797 + AO353_07225 0.30 -0.4
1,584,797 + AO353_07225 0.30 +1.8
1,584,797 + AO353_07225 0.30 +1.0
1,584,797 + AO353_07225 0.30 +0.6
1,584,797 + AO353_07225 0.30 +0.6
1,584,798 - AO353_07225 0.31 +0.4
1,584,798 - AO353_07225 0.31 +0.4
1,584,798 - AO353_07225 0.31 -1.4
1,584,798 - AO353_07225 0.31 +0.0
1,584,798 - AO353_07225 0.31 +0.2
1,584,798 - AO353_07225 0.31 -1.5
1,584,798 - AO353_07225 0.31 -0.1
1,584,798 - AO353_07225 0.31 -1.0
1,584,798 - AO353_07225 0.31 -0.8
1,584,798 - AO353_07225 0.31 -0.4
1,584,798 - AO353_07225 0.31 +0.2
1,584,798 - AO353_07225 0.31 +0.4
1,584,798 - AO353_07225 0.31 +1.6
1,584,798 - AO353_07225 0.31 -0.9
1,584,798 - AO353_07225 0.31 -0.2

Or see this region's nucleotide sequence