Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06765 and AO353_06770 are separated by 56 nucleotides AO353_06770 and AO353_06775 overlap by 8 nucleotides AO353_06775 and AO353_06780 are separated by 364 nucleotides
AO353_06765: AO353_06765 - hypothetical protein, at 1,502,510 to 1,503,208
_06765
AO353_06770: AO353_06770 - NAD-dependent dehydratase, at 1,503,265 to 1,504,194
_06770
AO353_06775: AO353_06775 - dTDP-4-dehydrorhamnose reductase, at 1,504,187 to 1,505,071
_06775
AO353_06780: AO353_06780 - DNA repair helicase Lhr (from data) , at 1,505,436 to 1,509,752
_06780
Position (kb)
1504
1505
1506 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1503.197 kb on + strand at 1503.197 kb on + strand at 1503.198 kb on - strand at 1503.206 kb on + strand at 1503.206 kb on + strand at 1503.207 kb on - strand at 1503.207 kb on - strand at 1503.207 kb on - strand at 1504.201 kb on - strand at 1504.208 kb on - strand at 1504.215 kb on - strand at 1504.440 kb on + strand, within AO353_06775 at 1504.440 kb on + strand, within AO353_06775 at 1504.440 kb on + strand, within AO353_06775 at 1504.440 kb on + strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.441 kb on - strand, within AO353_06775 at 1504.732 kb on - strand, within AO353_06775 at 1504.790 kb on - strand, within AO353_06775 at 1504.790 kb on - strand, within AO353_06775 at 1504.790 kb on - strand, within AO353_06775 at 1504.790 kb on - strand, within AO353_06775 at 1504.790 kb on - strand, within AO353_06775 at 1504.888 kb on - strand, within AO353_06775 at 1504.888 kb on - strand, within AO353_06775 at 1504.888 kb on - strand, within AO353_06775 at 1504.888 kb on - strand, within AO353_06775 at 1504.891 kb on - strand, within AO353_06775 at 1504.891 kb on - strand, within AO353_06775 at 1504.891 kb on - strand, within AO353_06775 at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.057 kb on - strand at 1505.071 kb on + strand at 1505.191 kb on + strand at 1505.191 kb on + strand at 1505.191 kb on + strand at 1505.191 kb on + strand at 1505.191 kb on + strand at 1505.192 kb on - strand at 1505.192 kb on - strand at 1505.192 kb on - strand at 1505.192 kb on - strand at 1505.192 kb on - strand at 1505.198 kb on + strand at 1505.198 kb on + strand at 1505.198 kb on + strand at 1505.198 kb on + strand at 1505.198 kb on + strand at 1505.198 kb on + strand at 1505.198 kb on + strand at 1505.199 kb on - strand at 1505.199 kb on - strand at 1505.199 kb on - strand at 1505.199 kb on - strand at 1505.425 kb on + strand at 1505.425 kb on + strand at 1505.425 kb on + strand at 1505.425 kb on + strand at 1505.425 kb on + strand at 1505.425 kb on + strand at 1505.426 kb on - strand at 1505.426 kb on - strand at 1505.431 kb on - strand at 1505.672 kb on - strand at 1505.694 kb on + strand at 1505.694 kb on + strand at 1505.694 kb on + strand at 1505.694 kb on + strand at 1505.694 kb on + strand at 1505.695 kb on - strand at 1505.695 kb on - strand at 1505.797 kb on + strand at 1505.797 kb on + strand at 1505.797 kb on + strand at 1505.797 kb on + strand at 1505.798 kb on - strand at 1505.901 kb on + strand, within AO353_06780 at 1505.901 kb on + strand, within AO353_06780 at 1505.901 kb on + strand, within AO353_06780 at 1505.901 kb on + strand, within AO353_06780 at 1505.901 kb on + strand, within AO353_06780 at 1505.901 kb on + strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780 at 1505.902 kb on - strand, within AO353_06780
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,503,197 + +1.1 1,503,197 + +0.2 1,503,198 - -0.6 1,503,206 + +0.6 1,503,206 + -1.3 1,503,207 - -0.9 1,503,207 - -1.4 1,503,207 - -0.5 1,504,201 - -0.8 1,504,208 - +0.5 1,504,215 - -0.5 1,504,440 + AO353_06775 0.29 +1.8 1,504,440 + AO353_06775 0.29 +1.3 1,504,440 + AO353_06775 0.29 +0.2 1,504,440 + AO353_06775 0.29 +0.6 1,504,441 - AO353_06775 0.29 -1.8 1,504,441 - AO353_06775 0.29 +1.5 1,504,441 - AO353_06775 0.29 +1.2 1,504,441 - AO353_06775 0.29 +0.2 1,504,441 - AO353_06775 0.29 -0.3 1,504,441 - AO353_06775 0.29 +0.2 1,504,441 - AO353_06775 0.29 +1.2 1,504,441 - AO353_06775 0.29 +0.2 1,504,732 - AO353_06775 0.62 -0.3 1,504,790 - AO353_06775 0.68 +0.4 1,504,790 - AO353_06775 0.68 +0.2 1,504,790 - AO353_06775 0.68 -0.2 1,504,790 - AO353_06775 0.68 +0.3 1,504,790 - AO353_06775 0.68 -0.4 1,504,888 - AO353_06775 0.79 -0.0 1,504,888 - AO353_06775 0.79 +0.9 1,504,888 - AO353_06775 0.79 +0.9 1,504,888 - AO353_06775 0.79 +0.5 1,504,891 - AO353_06775 0.80 +0.8 1,504,891 - AO353_06775 0.80 -1.4 1,504,891 - AO353_06775 0.80 +0.3 1,505,057 - -2.8 1,505,057 - +0.2 1,505,057 - +1.1 1,505,057 - +0.2 1,505,057 - +0.7 1,505,057 - +1.1 1,505,057 - +0.8 1,505,057 - -1.4 1,505,071 + -0.8 1,505,191 + +0.7 1,505,191 + +0.5 1,505,191 + +1.0 1,505,191 + +0.2 1,505,191 + -0.3 1,505,192 - +1.8 1,505,192 - -0.5 1,505,192 - +1.1 1,505,192 - -0.0 1,505,192 - -0.0 1,505,198 + -0.9 1,505,198 + +0.6 1,505,198 + +1.1 1,505,198 + +0.3 1,505,198 + +0.7 1,505,198 + -0.1 1,505,198 + +0.8 1,505,199 - +2.5 1,505,199 - -0.2 1,505,199 - -1.5 1,505,199 - -0.6 1,505,425 + +0.4 1,505,425 + +0.0 1,505,425 + -1.1 1,505,425 + -0.2 1,505,425 + +0.5 1,505,425 + +0.6 1,505,426 - +0.2 1,505,426 - -0.7 1,505,431 - -0.4 1,505,672 - -2.0 1,505,694 + -0.2 1,505,694 + -0.2 1,505,694 + +0.5 1,505,694 + -0.6 1,505,694 + -0.2 1,505,695 - -1.4 1,505,695 - -1.4 1,505,797 + +0.1 1,505,797 + -1.2 1,505,797 + +0.4 1,505,797 + +0.6 1,505,798 - +0.2 1,505,901 + AO353_06780 0.11 +1.8 1,505,901 + AO353_06780 0.11 +0.2 1,505,901 + AO353_06780 0.11 -0.8 1,505,901 + AO353_06780 0.11 +0.8 1,505,901 + AO353_06780 0.11 +0.2 1,505,901 + AO353_06780 0.11 -0.6 1,505,902 - AO353_06780 0.11 +0.2 1,505,902 - AO353_06780 0.11 +0.8 1,505,902 - AO353_06780 0.11 -1.8 1,505,902 - AO353_06780 0.11 +0.8 1,505,902 - AO353_06780 0.11 -0.2 1,505,902 - AO353_06780 0.11 -1.5 1,505,902 - AO353_06780 0.11 +0.2 1,505,902 - AO353_06780 0.11 -0.2
Or see this region's nucleotide sequence