Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05610 and AO353_05615 are separated by 106 nucleotides AO353_05615 and AO353_05620 are separated by 9 nucleotides AO353_05620 and AO353_05625 are separated by 28 nucleotides AO353_05625 and AO353_05630 overlap by 4 nucleotides
AO353_05610: AO353_05610 - 23S rRNA methyltransferase, at 1,239,809 to 1,240,459
_05610
AO353_05615: AO353_05615 - RNA-binding protein, at 1,240,566 to 1,240,874
_05615
AO353_05620: AO353_05620 - MFS transporter, at 1,240,884 to 1,241,288
_05620
AO353_05625: AO353_05625 - transcription elongation factor GreA, at 1,241,317 to 1,241,793
_05625
AO353_05630: AO353_05630 - carbamoyl phosphate synthase large subunit, at 1,241,790 to 1,245,011
_05630
Position (kb)
1241
1242 Strain fitness (log2 ratio)
-1
0
1 at 1240.478 kb on - strand at 1240.493 kb on - strand at 1240.540 kb on - strand at 1240.566 kb on - strand at 1240.566 kb on - strand at 1240.819 kb on - strand, within AO353_05615 at 1240.933 kb on - strand, within AO353_05620 at 1240.933 kb on - strand, within AO353_05620 at 1240.933 kb on - strand, within AO353_05620 at 1240.933 kb on - strand, within AO353_05620 at 1240.933 kb on - strand, within AO353_05620 at 1240.970 kb on - strand, within AO353_05620 at 1240.970 kb on - strand, within AO353_05620 at 1240.970 kb on - strand, within AO353_05620 at 1241.024 kb on - strand, within AO353_05620 at 1241.024 kb on - strand, within AO353_05620 at 1241.024 kb on - strand, within AO353_05620 at 1241.024 kb on - strand, within AO353_05620 at 1241.024 kb on - strand, within AO353_05620 at 1241.024 kb on - strand, within AO353_05620 at 1241.039 kb on - strand, within AO353_05620 at 1241.080 kb on - strand, within AO353_05620 at 1241.208 kb on - strand, within AO353_05620 at 1241.208 kb on - strand, within AO353_05620 at 1241.323 kb on - strand at 1241.481 kb on - strand, within AO353_05625 at 1241.652 kb on - strand, within AO353_05625 at 1241.652 kb on - strand, within AO353_05625 at 1241.652 kb on - strand, within AO353_05625 at 1241.811 kb on + strand at 1241.812 kb on - strand at 1241.812 kb on - strand at 1241.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,240,478 - +0.7 1,240,493 - +1.5 1,240,540 - -0.3 1,240,566 - +0.6 1,240,566 - +0.9 1,240,819 - AO353_05615 0.82 -1.1 1,240,933 - AO353_05620 0.12 -1.7 1,240,933 - AO353_05620 0.12 -0.1 1,240,933 - AO353_05620 0.12 -0.9 1,240,933 - AO353_05620 0.12 +0.4 1,240,933 - AO353_05620 0.12 -0.0 1,240,970 - AO353_05620 0.21 -0.4 1,240,970 - AO353_05620 0.21 +0.6 1,240,970 - AO353_05620 0.21 -0.1 1,241,024 - AO353_05620 0.35 +0.1 1,241,024 - AO353_05620 0.35 +0.6 1,241,024 - AO353_05620 0.35 -0.3 1,241,024 - AO353_05620 0.35 +0.7 1,241,024 - AO353_05620 0.35 +0.5 1,241,024 - AO353_05620 0.35 +0.1 1,241,039 - AO353_05620 0.38 -0.0 1,241,080 - AO353_05620 0.48 -1.6 1,241,208 - AO353_05620 0.80 +1.3 1,241,208 - AO353_05620 0.80 +0.5 1,241,323 - +1.4 1,241,481 - AO353_05625 0.34 -0.7 1,241,652 - AO353_05625 0.70 -1.1 1,241,652 - AO353_05625 0.70 -1.7 1,241,652 - AO353_05625 0.70 +0.4 1,241,811 + +1.3 1,241,812 - +0.7 1,241,812 - -0.9 1,241,812 - -0.9
Or see this region's nucleotide sequence