Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05180 and AO353_05185 are separated by 109 nucleotides AO353_05185 and AO353_05190 are separated by 12 nucleotides AO353_05190 and AO353_05195 are separated by 2 nucleotides AO353_05195 and AO353_05200 are separated by 15 nucleotides AO353_05200 and AO353_05205 are separated by 218 nucleotides
AO353_05180: AO353_05180 - RNA polymerase sigma-54 factor, at 1,139,535 to 1,141,028
_05180
AO353_05185: AO353_05185 - hypothetical protein, at 1,141,138 to 1,141,446
_05185
AO353_05190: AO353_05190 - PTS fructose transporter subunit IIA, at 1,141,459 to 1,141,923
_05190
AO353_05195: AO353_05195 - glmZ(sRNA)-inactivating NTPase, at 1,141,926 to 1,142,783
_05195
AO353_05200: AO353_05200 - phosphocarrier protein HPr, at 1,142,799 to 1,143,071
_05200
AO353_05205: AO353_05205 - peptidase PmbA, at 1,143,290 to 1,144,636
_05205
Position (kb)
1141
1142
1143 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1141.041 kb on + strand at 1141.082 kb on + strand at 1141.110 kb on + strand at 1141.110 kb on + strand at 1141.137 kb on + strand at 1141.137 kb on + strand at 1141.137 kb on + strand at 1141.137 kb on + strand at 1141.137 kb on + strand at 1141.137 kb on + strand at 1141.137 kb on + strand at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.192 kb on + strand, within AO353_05185 at 1141.217 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.348 kb on + strand, within AO353_05185 at 1141.401 kb on + strand, within AO353_05185 at 1141.921 kb on + strand at 1141.921 kb on + strand at 1141.922 kb on - strand at 1141.922 kb on - strand at 1141.922 kb on - strand at 1141.922 kb on - strand at 1141.964 kb on + strand at 1141.970 kb on + strand at 1141.970 kb on + strand at 1141.971 kb on - strand at 1141.971 kb on - strand at 1141.984 kb on + strand at 1141.984 kb on + strand at 1141.984 kb on + strand at 1141.984 kb on + strand at 1141.985 kb on - strand at 1141.985 kb on - strand at 1141.985 kb on - strand at 1141.985 kb on - strand at 1141.985 kb on - strand at 1142.001 kb on + strand at 1142.001 kb on + strand at 1142.004 kb on + strand at 1142.005 kb on - strand at 1142.005 kb on - strand at 1142.005 kb on - strand at 1142.005 kb on - strand at 1142.005 kb on - strand at 1142.190 kb on + strand, within AO353_05195 at 1142.191 kb on - strand, within AO353_05195 at 1142.191 kb on - strand, within AO353_05195 at 1142.364 kb on + strand, within AO353_05195 at 1142.364 kb on + strand, within AO353_05195 at 1142.364 kb on + strand, within AO353_05195 at 1142.365 kb on - strand, within AO353_05195 at 1142.365 kb on - strand, within AO353_05195 at 1142.379 kb on - strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.488 kb on + strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.489 kb on - strand, within AO353_05195 at 1142.562 kb on + strand, within AO353_05195 at 1142.613 kb on + strand, within AO353_05195 at 1142.613 kb on + strand, within AO353_05195 at 1142.613 kb on + strand, within AO353_05195 at 1142.614 kb on - strand, within AO353_05195 at 1142.614 kb on - strand, within AO353_05195 at 1142.614 kb on - strand, within AO353_05195 at 1142.614 kb on - strand, within AO353_05195 at 1142.614 kb on - strand, within AO353_05195 at 1142.614 kb on - strand, within AO353_05195 at 1142.658 kb on + strand, within AO353_05195 at 1142.658 kb on + strand, within AO353_05195 at 1142.658 kb on + strand, within AO353_05195 at 1142.658 kb on + strand, within AO353_05195 at 1142.659 kb on - strand, within AO353_05195 at 1142.659 kb on - strand, within AO353_05195 at 1142.659 kb on - strand, within AO353_05195 at 1142.659 kb on - strand, within AO353_05195 at 1142.659 kb on - strand, within AO353_05195 at 1142.706 kb on + strand at 1142.707 kb on - strand at 1142.777 kb on + strand at 1142.777 kb on + strand at 1142.777 kb on + strand at 1142.777 kb on + strand at 1142.778 kb on - strand at 1142.778 kb on - strand at 1142.778 kb on - strand at 1142.778 kb on - strand at 1142.778 kb on - strand at 1142.778 kb on - strand at 1142.778 kb on - strand at 1142.781 kb on + strand at 1142.781 kb on + strand at 1142.781 kb on + strand at 1142.782 kb on - strand at 1142.782 kb on - strand at 1143.051 kb on + strand at 1143.051 kb on + strand at 1143.051 kb on + strand at 1143.051 kb on + strand at 1143.051 kb on + strand at 1143.051 kb on + strand at 1143.051 kb on + strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.052 kb on - strand at 1143.069 kb on + strand at 1143.069 kb on + strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.086 kb on - strand at 1143.157 kb on - strand at 1143.157 kb on - strand at 1143.276 kb on + strand at 1143.291 kb on + strand at 1143.292 kb on - strand at 1143.391 kb on + strand at 1143.391 kb on + strand at 1143.391 kb on + strand at 1143.391 kb on + strand at 1143.391 kb on + strand at 1143.391 kb on + strand at 1143.391 kb on + strand at 1143.392 kb on - strand at 1143.392 kb on - strand at 1143.392 kb on - strand at 1143.412 kb on + strand at 1143.412 kb on + strand at 1143.412 kb on + strand at 1143.412 kb on + strand at 1143.412 kb on + strand at 1143.480 kb on + strand, within AO353_05205 at 1143.480 kb on + strand, within AO353_05205 at 1143.480 kb on + strand, within AO353_05205 at 1143.480 kb on + strand, within AO353_05205 at 1143.648 kb on + strand, within AO353_05205 at 1143.648 kb on + strand, within AO353_05205 at 1143.648 kb on + strand, within AO353_05205 at 1143.648 kb on + strand, within AO353_05205 at 1143.649 kb on - strand, within AO353_05205 at 1143.649 kb on - strand, within AO353_05205 at 1143.649 kb on - strand, within AO353_05205 at 1143.652 kb on + strand, within AO353_05205 at 1143.653 kb on - strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.663 kb on + strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.664 kb on - strand, within AO353_05205 at 1143.702 kb on + strand, within AO353_05205 at 1143.702 kb on + strand, within AO353_05205 at 1143.702 kb on + strand, within AO353_05205 at 1143.703 kb on - strand, within AO353_05205 at 1143.703 kb on - strand, within AO353_05205 at 1143.703 kb on - strand, within AO353_05205 at 1143.703 kb on - strand, within AO353_05205
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 1,141,041 + +0.9 1,141,082 + +0.4 1,141,110 + -1.3 1,141,110 + +0.4 1,141,137 + +0.6 1,141,137 + -0.2 1,141,137 + +0.1 1,141,137 + -2.4 1,141,137 + +0.7 1,141,137 + +1.1 1,141,137 + -0.6 1,141,192 + AO353_05185 0.17 +0.1 1,141,192 + AO353_05185 0.17 +0.1 1,141,192 + AO353_05185 0.17 +0.7 1,141,192 + AO353_05185 0.17 -0.2 1,141,192 + AO353_05185 0.17 -0.5 1,141,192 + AO353_05185 0.17 -1.6 1,141,192 + AO353_05185 0.17 +0.4 1,141,192 + AO353_05185 0.17 -0.1 1,141,192 + AO353_05185 0.17 +0.4 1,141,217 + AO353_05185 0.26 +0.8 1,141,348 + AO353_05185 0.68 +0.4 1,141,348 + AO353_05185 0.68 -0.2 1,141,348 + AO353_05185 0.68 -0.2 1,141,348 + AO353_05185 0.68 -0.3 1,141,348 + AO353_05185 0.68 +0.1 1,141,348 + AO353_05185 0.68 +0.4 1,141,348 + AO353_05185 0.68 -0.9 1,141,348 + AO353_05185 0.68 +0.1 1,141,348 + AO353_05185 0.68 +0.5 1,141,348 + AO353_05185 0.68 +0.2 1,141,348 + AO353_05185 0.68 -0.0 1,141,348 + AO353_05185 0.68 -0.3 1,141,348 + AO353_05185 0.68 +0.4 1,141,348 + AO353_05185 0.68 -0.5 1,141,348 + AO353_05185 0.68 -0.6 1,141,348 + AO353_05185 0.68 +0.7 1,141,348 + AO353_05185 0.68 +0.1 1,141,401 + AO353_05185 0.85 +0.1 1,141,921 + -1.3 1,141,921 + +1.1 1,141,922 - -1.5 1,141,922 - -2.7 1,141,922 - -1.1 1,141,922 - +1.7 1,141,964 + -2.0 1,141,970 + -0.4 1,141,970 + -1.3 1,141,971 - -2.3 1,141,971 - -1.8 1,141,984 + -1.4 1,141,984 + +0.7 1,141,984 + -1.4 1,141,984 + -0.9 1,141,985 - -0.0 1,141,985 - -0.9 1,141,985 - -1.6 1,141,985 - -2.3 1,141,985 - +0.2 1,142,001 + -0.6 1,142,001 + +0.4 1,142,004 + -2.3 1,142,005 - -1.3 1,142,005 - -2.1 1,142,005 - -0.8 1,142,005 - -1.6 1,142,005 - -1.4 1,142,190 + AO353_05195 0.31 -0.8 1,142,191 - AO353_05195 0.31 -2.7 1,142,191 - AO353_05195 0.31 -2.7 1,142,364 + AO353_05195 0.51 -1.3 1,142,364 + AO353_05195 0.51 -1.4 1,142,364 + AO353_05195 0.51 -1.9 1,142,365 - AO353_05195 0.51 -4.0 1,142,365 - AO353_05195 0.51 -1.8 1,142,379 - AO353_05195 0.53 -1.9 1,142,488 + AO353_05195 0.66 +0.1 1,142,488 + AO353_05195 0.66 -1.3 1,142,488 + AO353_05195 0.66 -0.5 1,142,488 + AO353_05195 0.66 -1.2 1,142,488 + AO353_05195 0.66 -0.5 1,142,488 + AO353_05195 0.66 -2.0 1,142,488 + AO353_05195 0.66 -1.3 1,142,489 - AO353_05195 0.66 -2.1 1,142,489 - AO353_05195 0.66 -0.8 1,142,489 - AO353_05195 0.66 -0.6 1,142,489 - AO353_05195 0.66 -0.8 1,142,489 - AO353_05195 0.66 -1.5 1,142,489 - AO353_05195 0.66 -0.0 1,142,489 - AO353_05195 0.66 -0.0 1,142,489 - AO353_05195 0.66 -1.0 1,142,489 - AO353_05195 0.66 -4.0 1,142,489 - AO353_05195 0.66 -0.3 1,142,489 - AO353_05195 0.66 -2.3 1,142,489 - AO353_05195 0.66 -1.3 1,142,562 + AO353_05195 0.74 -2.9 1,142,613 + AO353_05195 0.80 -1.2 1,142,613 + AO353_05195 0.80 -2.0 1,142,613 + AO353_05195 0.80 -1.1 1,142,614 - AO353_05195 0.80 -2.2 1,142,614 - AO353_05195 0.80 -0.2 1,142,614 - AO353_05195 0.80 -1.0 1,142,614 - AO353_05195 0.80 -1.1 1,142,614 - AO353_05195 0.80 -0.7 1,142,614 - AO353_05195 0.80 -1.1 1,142,658 + AO353_05195 0.85 -0.7 1,142,658 + AO353_05195 0.85 -1.2 1,142,658 + AO353_05195 0.85 -1.8 1,142,658 + AO353_05195 0.85 -1.0 1,142,659 - AO353_05195 0.85 -0.3 1,142,659 - AO353_05195 0.85 -2.4 1,142,659 - AO353_05195 0.85 +0.1 1,142,659 - AO353_05195 0.85 -2.7 1,142,659 - AO353_05195 0.85 -0.3 1,142,706 + +0.1 1,142,707 - -1.1 1,142,777 + +1.4 1,142,777 + +0.3 1,142,777 + +0.5 1,142,777 + +1.1 1,142,778 - -0.4 1,142,778 - +0.3 1,142,778 - +0.0 1,142,778 - +0.8 1,142,778 - +0.0 1,142,778 - -2.0 1,142,778 - +1.7 1,142,781 + -0.5 1,142,781 + +0.9 1,142,781 + -0.9 1,142,782 - -0.5 1,142,782 - +0.0 1,143,051 + +0.8 1,143,051 + -0.3 1,143,051 + +0.6 1,143,051 + +1.0 1,143,051 + +1.0 1,143,051 + -0.0 1,143,051 + -1.4 1,143,052 - -0.2 1,143,052 - +1.7 1,143,052 - -0.6 1,143,052 - +1.1 1,143,052 - +0.3 1,143,052 - +0.9 1,143,052 - +1.5 1,143,052 - +0.9 1,143,052 - +0.2 1,143,069 + +1.4 1,143,069 + -1.1 1,143,086 - +0.3 1,143,086 - +0.3 1,143,086 - -1.2 1,143,086 - +0.4 1,143,086 - -0.0 1,143,086 - +0.4 1,143,086 - +0.4 1,143,086 - -0.6 1,143,086 - +0.1 1,143,086 - -0.3 1,143,086 - -1.1 1,143,157 - +1.0 1,143,157 - -1.2 1,143,276 + +0.4 1,143,291 + -0.1 1,143,292 - +0.7 1,143,391 + -0.3 1,143,391 + -0.8 1,143,391 + +1.5 1,143,391 + +0.7 1,143,391 + -0.8 1,143,391 + -0.3 1,143,391 + +0.4 1,143,392 - +0.5 1,143,392 - -0.7 1,143,392 - -0.9 1,143,412 + +0.0 1,143,412 + +1.0 1,143,412 + -0.4 1,143,412 + +1.1 1,143,412 + +0.4 1,143,480 + AO353_05205 0.14 -1.2 1,143,480 + AO353_05205 0.14 -0.8 1,143,480 + AO353_05205 0.14 -0.5 1,143,480 + AO353_05205 0.14 -1.1 1,143,648 + AO353_05205 0.27 -0.6 1,143,648 + AO353_05205 0.27 -0.5 1,143,648 + AO353_05205 0.27 -1.0 1,143,648 + AO353_05205 0.27 -0.3 1,143,649 - AO353_05205 0.27 +0.0 1,143,649 - AO353_05205 0.27 -2.5 1,143,649 - AO353_05205 0.27 -2.2 1,143,652 + AO353_05205 0.27 -0.2 1,143,653 - AO353_05205 0.27 +1.1 1,143,663 + AO353_05205 0.28 +0.8 1,143,663 + AO353_05205 0.28 +0.4 1,143,663 + AO353_05205 0.28 -0.5 1,143,663 + AO353_05205 0.28 -0.7 1,143,663 + AO353_05205 0.28 +1.0 1,143,663 + AO353_05205 0.28 +1.4 1,143,663 + AO353_05205 0.28 -1.0 1,143,663 + AO353_05205 0.28 -0.5 1,143,663 + AO353_05205 0.28 +0.7 1,143,663 + AO353_05205 0.28 +0.4 1,143,663 + AO353_05205 0.28 +0.4 1,143,663 + AO353_05205 0.28 +0.8 1,143,663 + AO353_05205 0.28 +1.7 1,143,663 + AO353_05205 0.28 +1.4 1,143,663 + AO353_05205 0.28 +0.1 1,143,663 + AO353_05205 0.28 +2.0 1,143,663 + AO353_05205 0.28 +0.8 1,143,663 + AO353_05205 0.28 +0.6 1,143,663 + AO353_05205 0.28 +1.7 1,143,663 + AO353_05205 0.28 -0.2 1,143,663 + AO353_05205 0.28 -0.8 1,143,663 + AO353_05205 0.28 -0.0 1,143,663 + AO353_05205 0.28 +0.1 1,143,663 + AO353_05205 0.28 -1.5 1,143,663 + AO353_05205 0.28 -0.9 1,143,664 - AO353_05205 0.28 -1.3 1,143,664 - AO353_05205 0.28 -0.3 1,143,664 - AO353_05205 0.28 -0.6 1,143,664 - AO353_05205 0.28 +0.2 1,143,664 - AO353_05205 0.28 -0.4 1,143,664 - AO353_05205 0.28 -0.2 1,143,664 - AO353_05205 0.28 +1.3 1,143,664 - AO353_05205 0.28 +0.4 1,143,664 - AO353_05205 0.28 +0.7 1,143,664 - AO353_05205 0.28 -0.3 1,143,664 - AO353_05205 0.28 -0.1 1,143,664 - AO353_05205 0.28 -0.1 1,143,664 - AO353_05205 0.28 +0.5 1,143,664 - AO353_05205 0.28 -0.6 1,143,664 - AO353_05205 0.28 -1.9 1,143,664 - AO353_05205 0.28 -0.9 1,143,664 - AO353_05205 0.28 +0.3 1,143,664 - AO353_05205 0.28 -0.2 1,143,664 - AO353_05205 0.28 +1.0 1,143,664 - AO353_05205 0.28 +0.8 1,143,664 - AO353_05205 0.28 +0.0 1,143,664 - AO353_05205 0.28 +0.7 1,143,664 - AO353_05205 0.28 -1.0 1,143,702 + AO353_05205 0.31 -2.8 1,143,702 + AO353_05205 0.31 -0.1 1,143,702 + AO353_05205 0.31 -1.0 1,143,703 - AO353_05205 0.31 +1.1 1,143,703 - AO353_05205 0.31 -0.0 1,143,703 - AO353_05205 0.31 -0.3 1,143,703 - AO353_05205 0.31 +0.0
Or see this region's nucleotide sequence