Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03050

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03040 and AO353_03045 are separated by 36 nucleotidesAO353_03045 and AO353_03050 overlap by 4 nucleotidesAO353_03050 and AO353_03055 are separated by 91 nucleotides AO353_03040: AO353_03040 - ABC transporter for L-Arginine and L-Citrulline, ATPase component (from data), at 649,121 to 649,885 _03040 AO353_03045: AO353_03045 - ABC transporter for L-Arginine and L-Citrulline, permease component 1 (from data), at 649,922 to 650,620 _03045 AO353_03050: AO353_03050 - ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data), at 650,617 to 651,306 _03050 AO353_03055: AO353_03055 - ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data), at 651,398 to 652,174 _03055 Position (kb) 650 651 652Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 649.756 kb on + strand, within AO353_03040at 649.756 kb on + strand, within AO353_03040at 649.757 kb on - strand, within AO353_03040at 649.757 kb on - strand, within AO353_03040at 649.757 kb on - strand, within AO353_03040at 649.848 kb on + strandat 649.848 kb on + strandat 649.855 kb on + strandat 649.856 kb on - strandat 649.856 kb on - strandat 649.881 kb on + strandat 649.881 kb on + strandat 649.881 kb on + strandat 649.881 kb on + strandat 649.882 kb on - strandat 649.882 kb on - strandat 649.882 kb on - strandat 649.882 kb on - strandat 649.944 kb on + strandat 649.944 kb on + strandat 650.007 kb on + strand, within AO353_03045at 650.007 kb on + strand, within AO353_03045at 650.007 kb on + strand, within AO353_03045at 650.007 kb on + strand, within AO353_03045at 650.007 kb on + strand, within AO353_03045at 650.007 kb on + strand, within AO353_03045at 650.008 kb on - strand, within AO353_03045at 650.008 kb on - strand, within AO353_03045at 650.008 kb on - strand, within AO353_03045at 650.008 kb on - strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.028 kb on + strand, within AO353_03045at 650.046 kb on + strand, within AO353_03045at 650.046 kb on + strand, within AO353_03045at 650.046 kb on + strand, within AO353_03045at 650.046 kb on + strand, within AO353_03045at 650.046 kb on + strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.047 kb on - strand, within AO353_03045at 650.049 kb on + strand, within AO353_03045at 650.050 kb on - strand, within AO353_03045at 650.050 kb on - strand, within AO353_03045at 650.050 kb on - strand, within AO353_03045at 650.196 kb on + strand, within AO353_03045at 650.196 kb on + strand, within AO353_03045at 650.197 kb on - strand, within AO353_03045at 650.197 kb on - strand, within AO353_03045at 650.197 kb on - strand, within AO353_03045at 650.197 kb on - strand, within AO353_03045at 650.290 kb on - strand, within AO353_03045at 650.369 kb on + strand, within AO353_03045at 650.394 kb on + strand, within AO353_03045at 650.394 kb on + strand, within AO353_03045at 650.395 kb on - strand, within AO353_03045at 650.395 kb on - strand, within AO353_03045at 650.395 kb on - strand, within AO353_03045at 650.395 kb on - strand, within AO353_03045at 650.395 kb on - strand, within AO353_03045at 650.395 kb on - strand, within AO353_03045at 650.397 kb on + strand, within AO353_03045at 650.397 kb on + strand, within AO353_03045at 650.397 kb on + strand, within AO353_03045at 650.398 kb on - strand, within AO353_03045at 650.442 kb on + strand, within AO353_03045at 650.442 kb on + strand, within AO353_03045at 650.442 kb on + strand, within AO353_03045at 650.442 kb on + strand, within AO353_03045at 650.442 kb on + strand, within AO353_03045at 650.442 kb on + strand, within AO353_03045at 650.443 kb on - strand, within AO353_03045at 650.443 kb on - strand, within AO353_03045at 650.443 kb on - strand, within AO353_03045at 650.443 kb on - strand, within AO353_03045at 650.443 kb on - strand, within AO353_03045at 650.443 kb on - strand, within AO353_03045at 650.449 kb on - strand, within AO353_03045at 650.449 kb on - strand, within AO353_03045at 650.449 kb on - strand, within AO353_03045at 650.578 kb on - strandat 650.607 kb on + strandat 650.608 kb on - strandat 650.608 kb on - strandat 650.608 kb on - strandat 650.608 kb on - strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.620 kb on + strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.621 kb on - strandat 650.636 kb on - strandat 650.648 kb on + strandat 650.702 kb on + strandat 650.702 kb on + strand, within AO353_03050at 650.702 kb on + strand, within AO353_03050at 650.702 kb on + strand, within AO353_03050at 650.702 kb on + strand, within AO353_03050at 650.703 kb on - strand, within AO353_03050at 650.703 kb on - strand, within AO353_03050at 650.703 kb on - strand, within AO353_03050at 650.835 kb on + strand, within AO353_03050at 650.841 kb on + strand, within AO353_03050at 650.842 kb on - strand, within AO353_03050at 650.916 kb on - strand, within AO353_03050at 650.984 kb on + strand, within AO353_03050at 650.984 kb on + strand, within AO353_03050at 650.984 kb on + strand, within AO353_03050at 650.985 kb on - strand, within AO353_03050at 650.985 kb on - strand, within AO353_03050at 651.044 kb on + strand, within AO353_03050at 651.044 kb on + strand, within AO353_03050at 651.044 kb on + strand, within AO353_03050at 651.045 kb on - strand, within AO353_03050at 651.045 kb on - strand, within AO353_03050at 651.045 kb on - strand, within AO353_03050at 651.045 kb on - strand, within AO353_03050at 651.152 kb on + strand, within AO353_03050at 651.153 kb on - strand, within AO353_03050at 651.153 kb on - strand, within AO353_03050at 651.153 kb on - strand, within AO353_03050at 651.153 kb on - strand, within AO353_03050at 651.153 kb on - strand, within AO353_03050at 651.153 kb on - strand, within AO353_03050at 651.395 kb on + strandat 651.395 kb on + strandat 651.395 kb on + strandat 651.395 kb on + strandat 651.396 kb on - strandat 651.396 kb on - strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.399 kb on + strandat 651.400 kb on - strandat 651.400 kb on - strandat 651.400 kb on - strandat 651.400 kb on - strandat 651.400 kb on - strandat 651.403 kb on + strandat 651.408 kb on + strandat 651.408 kb on + strandat 651.409 kb on - strandat 651.412 kb on + strandat 651.426 kb on + strandat 651.426 kb on + strandat 651.427 kb on - strandat 651.427 kb on - strandat 651.427 kb on - strandat 651.427 kb on - strandat 651.427 kb on - strandat 651.427 kb on - strandat 651.447 kb on + strandat 651.448 kb on - strandat 651.448 kb on - strandat 651.448 kb on - strandat 651.526 kb on + strand, within AO353_03055at 651.547 kb on - strand, within AO353_03055at 651.547 kb on - strand, within AO353_03055at 651.547 kb on - strand, within AO353_03055at 651.547 kb on - strand, within AO353_03055at 651.547 kb on - strand, within AO353_03055at 651.547 kb on - strand, within AO353_03055at 651.675 kb on + strand, within AO353_03055at 651.676 kb on - strand, within AO353_03055at 651.676 kb on - strand, within AO353_03055at 651.696 kb on + strand, within AO353_03055at 651.852 kb on + strand, within AO353_03055at 651.852 kb on + strand, within AO353_03055at 651.852 kb on + strand, within AO353_03055at 651.852 kb on + strand, within AO353_03055at 651.852 kb on + strand, within AO353_03055at 651.852 kb on + strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.853 kb on - strand, within AO353_03055at 651.855 kb on + strand, within AO353_03055at 651.855 kb on + strand, within AO353_03055at 651.855 kb on + strand, within AO353_03055at 651.855 kb on + strand, within AO353_03055at 651.855 kb on + strand, within AO353_03055at 651.855 kb on + strand, within AO353_03055at 651.856 kb on - strand, within AO353_03055at 651.856 kb on - strand, within AO353_03055at 651.856 kb on - strand, within AO353_03055at 651.856 kb on - strand, within AO353_03055at 651.856 kb on - strand, within AO353_03055at 652.075 kb on - strand, within AO353_03055at 652.177 kb on + strandat 652.177 kb on + strandat 652.177 kb on + strandat 652.177 kb on + strandat 652.177 kb on + strandat 652.177 kb on + strandat 652.178 kb on - strandat 652.178 kb on - strandat 652.178 kb on - strandat 652.178 kb on - strandat 652.193 kb on + strandat 652.194 kb on - strandat 652.194 kb on - strandat 652.227 kb on + strandat 652.228 kb on - strandat 652.258 kb on + strandat 652.265 kb on + strandat 652.265 kb on + strandat 652.265 kb on + strandat 652.266 kb on - strandat 652.266 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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649,756 + AO353_03040 0.83 -0.6
649,756 + AO353_03040 0.83 +1.1
649,757 - AO353_03040 0.83 -0.8
649,757 - AO353_03040 0.83 -0.4
649,757 - AO353_03040 0.83 +0.3
649,848 + +1.0
649,848 + +0.4
649,855 + -0.9
649,856 - +2.2
649,856 - -1.0
649,881 + +0.3
649,881 + -1.3
649,881 + -1.2
649,881 + -0.3
649,882 - +2.2
649,882 - -0.4
649,882 - -0.2
649,882 - -0.3
649,944 + +0.6
649,944 + -0.8
650,007 + AO353_03045 0.12 -0.2
650,007 + AO353_03045 0.12 +0.6
650,007 + AO353_03045 0.12 +1.0
650,007 + AO353_03045 0.12 -0.2
650,007 + AO353_03045 0.12 +1.2
650,007 + AO353_03045 0.12 +2.3
650,008 - AO353_03045 0.12 +0.0
650,008 - AO353_03045 0.12 +0.4
650,008 - AO353_03045 0.12 -0.5
650,008 - AO353_03045 0.12 +0.2
650,028 + AO353_03045 0.15 -0.1
650,028 + AO353_03045 0.15 +0.9
650,028 + AO353_03045 0.15 +1.6
650,028 + AO353_03045 0.15 +1.4
650,028 + AO353_03045 0.15 -0.8
650,028 + AO353_03045 0.15 +0.2
650,028 + AO353_03045 0.15 -0.5
650,028 + AO353_03045 0.15 -1.2
650,028 + AO353_03045 0.15 +2.2
650,028 + AO353_03045 0.15 -1.0
650,028 + AO353_03045 0.15 +0.7
650,028 + AO353_03045 0.15 +1.9
650,046 + AO353_03045 0.18 +0.3
650,046 + AO353_03045 0.18 +0.2
650,046 + AO353_03045 0.18 -0.6
650,046 + AO353_03045 0.18 +0.6
650,046 + AO353_03045 0.18 +0.1
650,047 - AO353_03045 0.18 +0.6
650,047 - AO353_03045 0.18 -0.2
650,047 - AO353_03045 0.18 -1.6
650,047 - AO353_03045 0.18 +0.6
650,047 - AO353_03045 0.18 +0.2
650,047 - AO353_03045 0.18 +0.1
650,047 - AO353_03045 0.18 -0.6
650,047 - AO353_03045 0.18 -0.6
650,047 - AO353_03045 0.18 -1.9
650,047 - AO353_03045 0.18 -0.9
650,047 - AO353_03045 0.18 -2.4
650,047 - AO353_03045 0.18 +1.6
650,047 - AO353_03045 0.18 +1.0
650,047 - AO353_03045 0.18 -0.2
650,049 + AO353_03045 0.18 -0.6
650,050 - AO353_03045 0.18 +0.5
650,050 - AO353_03045 0.18 +0.6
650,050 - AO353_03045 0.18 -0.6
650,196 + AO353_03045 0.39 -0.8
650,196 + AO353_03045 0.39 +1.2
650,197 - AO353_03045 0.39 -1.2
650,197 - AO353_03045 0.39 -0.4
650,197 - AO353_03045 0.39 +0.6
650,197 - AO353_03045 0.39 +0.6
650,290 - AO353_03045 0.53 +0.3
650,369 + AO353_03045 0.64 +1.8
650,394 + AO353_03045 0.68 +1.9
650,394 + AO353_03045 0.68 +0.8
650,395 - AO353_03045 0.68 +0.6
650,395 - AO353_03045 0.68 +0.4
650,395 - AO353_03045 0.68 -1.7
650,395 - AO353_03045 0.68 -0.4
650,395 - AO353_03045 0.68 -0.2
650,395 - AO353_03045 0.68 -0.7
650,397 + AO353_03045 0.68 -0.6
650,397 + AO353_03045 0.68 +0.2
650,397 + AO353_03045 0.68 +0.0
650,398 - AO353_03045 0.68 -0.5
650,442 + AO353_03045 0.74 +0.2
650,442 + AO353_03045 0.74 -0.8
650,442 + AO353_03045 0.74 -1.2
650,442 + AO353_03045 0.74 -0.3
650,442 + AO353_03045 0.74 +0.6
650,442 + AO353_03045 0.74 -0.5
650,443 - AO353_03045 0.75 +1.2
650,443 - AO353_03045 0.75 -1.1
650,443 - AO353_03045 0.75 -1.4
650,443 - AO353_03045 0.75 -1.8
650,443 - AO353_03045 0.75 -0.2
650,443 - AO353_03045 0.75 +0.8
650,449 - AO353_03045 0.75 +0.4
650,449 - AO353_03045 0.75 -0.0
650,449 - AO353_03045 0.75 +0.9
650,578 - -0.3
650,607 + +0.8
650,608 - +0.6
650,608 - +2.9
650,608 - -0.4
650,608 - -0.8
650,620 + +0.7
650,620 + +1.2
650,620 + +0.9
650,620 + -0.0
650,620 + -0.5
650,620 + +1.2
650,620 + -0.1
650,620 + -0.0
650,621 - -0.4
650,621 - +0.6
650,621 - -1.4
650,621 - -0.8
650,621 - -0.2
650,621 - -0.4
650,621 - -0.0
650,621 - +0.1
650,621 - +0.9
650,636 - +3.9
650,648 + +0.6
650,702 + -0.0
650,702 + AO353_03050 0.12 -0.3
650,702 + AO353_03050 0.12 -0.3
650,702 + AO353_03050 0.12 +0.2
650,702 + AO353_03050 0.12 -1.9
650,703 - AO353_03050 0.12 +0.2
650,703 - AO353_03050 0.12 +0.7
650,703 - AO353_03050 0.12 -1.2
650,835 + AO353_03050 0.32 +0.7
650,841 + AO353_03050 0.32 +1.6
650,842 - AO353_03050 0.33 +0.2
650,916 - AO353_03050 0.43 +0.9
650,984 + AO353_03050 0.53 -0.2
650,984 + AO353_03050 0.53 +0.8
650,984 + AO353_03050 0.53 -0.2
650,985 - AO353_03050 0.53 +0.9
650,985 - AO353_03050 0.53 +1.6
651,044 + AO353_03050 0.62 +0.6
651,044 + AO353_03050 0.62 -0.0
651,044 + AO353_03050 0.62 +1.2
651,045 - AO353_03050 0.62 +0.9
651,045 - AO353_03050 0.62 +0.2
651,045 - AO353_03050 0.62 +1.2
651,045 - AO353_03050 0.62 +1.2
651,152 + AO353_03050 0.78 +1.8
651,153 - AO353_03050 0.78 +0.8
651,153 - AO353_03050 0.78 -0.0
651,153 - AO353_03050 0.78 -1.4
651,153 - AO353_03050 0.78 +0.4
651,153 - AO353_03050 0.78 +0.2
651,153 - AO353_03050 0.78 +0.6
651,395 + -0.1
651,395 + -0.7
651,395 + +0.8
651,395 + +1.6
651,396 - -0.6
651,396 - -0.4
651,399 + +1.0
651,399 + -1.4
651,399 + -0.4
651,399 + +0.6
651,399 + +0.2
651,399 + +1.8
651,399 + -1.2
651,399 + -1.0
651,399 + +2.6
651,399 + +2.2
651,399 + +0.4
651,399 + +1.0
651,399 + -0.0
651,399 + +0.3
651,400 - -0.3
651,400 - +0.3
651,400 - +0.5
651,400 - -0.4
651,400 - -1.0
651,403 + -1.4
651,408 + +0.4
651,408 + -0.2
651,409 - +1.2
651,412 + +0.4
651,426 + +0.5
651,426 + -0.1
651,427 - -1.5
651,427 - -0.3
651,427 - -0.1
651,427 - -0.1
651,427 - +0.1
651,427 - +0.2
651,447 + -0.1
651,448 - +0.3
651,448 - +0.1
651,448 - -0.0
651,526 + AO353_03055 0.16 -0.5
651,547 - AO353_03055 0.19 +1.0
651,547 - AO353_03055 0.19 +0.1
651,547 - AO353_03055 0.19 +1.1
651,547 - AO353_03055 0.19 +1.6
651,547 - AO353_03055 0.19 +0.8
651,547 - AO353_03055 0.19 -0.8
651,675 + AO353_03055 0.36 +1.0
651,676 - AO353_03055 0.36 +0.6
651,676 - AO353_03055 0.36 +2.1
651,696 + AO353_03055 0.38 +0.7
651,852 + AO353_03055 0.58 +0.9
651,852 + AO353_03055 0.58 -0.8
651,852 + AO353_03055 0.58 +3.2
651,852 + AO353_03055 0.58 -0.4
651,852 + AO353_03055 0.58 +1.2
651,852 + AO353_03055 0.58 -0.0
651,853 - AO353_03055 0.59 -1.0
651,853 - AO353_03055 0.59 +1.0
651,853 - AO353_03055 0.59 -0.1
651,853 - AO353_03055 0.59 +0.3
651,853 - AO353_03055 0.59 +0.9
651,853 - AO353_03055 0.59 +0.7
651,853 - AO353_03055 0.59 +1.8
651,853 - AO353_03055 0.59 +0.2
651,853 - AO353_03055 0.59 -2.4
651,855 + AO353_03055 0.59 +0.6
651,855 + AO353_03055 0.59 +0.9
651,855 + AO353_03055 0.59 -2.9
651,855 + AO353_03055 0.59 -2.3
651,855 + AO353_03055 0.59 -1.1
651,855 + AO353_03055 0.59 +0.9
651,856 - AO353_03055 0.59 +1.0
651,856 - AO353_03055 0.59 +0.1
651,856 - AO353_03055 0.59 -0.3
651,856 - AO353_03055 0.59 -0.5
651,856 - AO353_03055 0.59 -0.9
652,075 - AO353_03055 0.87 -0.4
652,177 + -1.1
652,177 + +0.8
652,177 + +0.1
652,177 + -1.0
652,177 + +0.6
652,177 + +2.6
652,178 - -0.6
652,178 - +0.4
652,178 - -0.4
652,178 - +0.3
652,193 + -0.1
652,194 - +0.8
652,194 - -0.6
652,227 + +0.3
652,228 - -0.2
652,258 + +0.2
652,265 + -0.3
652,265 + -0.2
652,265 + +0.7
652,266 - +0.3
652,266 - -0.1

Or see this region's nucleotide sequence