Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02715 and AO353_02720 overlap by 1 nucleotides AO353_02720 and AO353_02725 are separated by 210 nucleotides AO353_02725 and AO353_02730 are separated by 37 nucleotides
AO353_02715: AO353_02715 - 23S rRNA methyltransferase, at 577,144 to 578,496
_02715
AO353_02720: AO353_02720 - cysteine synthase, at 578,496 to 579,398
_02720
AO353_02725: AO353_02725 - histidine kinase, at 579,609 to 580,298
_02725
AO353_02730: AO353_02730 - transcriptional regulator, at 580,336 to 581,058
_02730
Position (kb)
578
579
580 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 577.549 kb on - strand, within AO353_02715 at 577.948 kb on + strand, within AO353_02715 at 577.948 kb on + strand, within AO353_02715 at 578.355 kb on + strand, within AO353_02715 at 578.355 kb on + strand, within AO353_02715 at 578.356 kb on - strand, within AO353_02715 at 578.530 kb on + strand at 578.607 kb on + strand, within AO353_02720 at 578.726 kb on - strand, within AO353_02720 at 578.726 kb on - strand, within AO353_02720 at 578.726 kb on - strand, within AO353_02720 at 578.726 kb on - strand, within AO353_02720 at 578.740 kb on + strand, within AO353_02720 at 578.740 kb on + strand, within AO353_02720 at 578.740 kb on + strand, within AO353_02720 at 578.740 kb on + strand, within AO353_02720 at 578.740 kb on + strand, within AO353_02720 at 578.741 kb on - strand, within AO353_02720 at 578.741 kb on - strand, within AO353_02720 at 578.833 kb on + strand, within AO353_02720 at 578.888 kb on + strand, within AO353_02720 at 578.889 kb on - strand, within AO353_02720 at 578.889 kb on - strand, within AO353_02720 at 578.935 kb on + strand, within AO353_02720 at 578.936 kb on - strand, within AO353_02720 at 578.936 kb on - strand, within AO353_02720 at 578.936 kb on - strand, within AO353_02720 at 578.936 kb on - strand, within AO353_02720 at 578.936 kb on - strand, within AO353_02720 at 579.284 kb on + strand, within AO353_02720 at 579.386 kb on - strand at 579.404 kb on - strand at 579.436 kb on + strand at 579.436 kb on + strand at 579.437 kb on - strand at 579.496 kb on - strand at 579.598 kb on - strand at 579.610 kb on + strand at 579.629 kb on + strand at 579.629 kb on + strand at 579.630 kb on - strand at 579.630 kb on - strand at 579.630 kb on - strand at 579.630 kb on - strand at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.773 kb on + strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.774 kb on - strand, within AO353_02725 at 579.832 kb on + strand, within AO353_02725 at 579.832 kb on + strand, within AO353_02725 at 579.832 kb on + strand, within AO353_02725 at 579.833 kb on - strand, within AO353_02725 at 579.833 kb on - strand, within AO353_02725 at 579.833 kb on - strand, within AO353_02725 at 579.833 kb on - strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.929 kb on + strand, within AO353_02725 at 579.930 kb on - strand, within AO353_02725 at 579.930 kb on - strand, within AO353_02725 at 579.930 kb on - strand, within AO353_02725 at 580.003 kb on + strand, within AO353_02725 at 580.004 kb on - strand, within AO353_02725 at 580.041 kb on + strand, within AO353_02725 at 580.041 kb on + strand, within AO353_02725 at 580.041 kb on + strand, within AO353_02725 at 580.042 kb on - strand, within AO353_02725 at 580.110 kb on + strand, within AO353_02725 at 580.111 kb on - strand, within AO353_02725 at 580.111 kb on - strand, within AO353_02725 at 580.111 kb on - strand, within AO353_02725 at 580.155 kb on + strand, within AO353_02725 at 580.155 kb on + strand, within AO353_02725 at 580.155 kb on + strand, within AO353_02725 at 580.156 kb on - strand, within AO353_02725 at 580.156 kb on - strand, within AO353_02725 at 580.236 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.363 kb on + strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.364 kb on - strand at 580.367 kb on + strand at 580.367 kb on + strand at 580.367 kb on + strand at 580.367 kb on + strand at 580.367 kb on + strand at 580.367 kb on + strand at 580.368 kb on - strand at 580.368 kb on - strand at 580.368 kb on - strand at 580.368 kb on - strand at 580.368 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 577,549 - AO353_02715 0.30 +0.9 577,948 + AO353_02715 0.59 -0.4 577,948 + AO353_02715 0.59 -0.8 578,355 + AO353_02715 0.90 -0.0 578,355 + AO353_02715 0.90 -0.3 578,356 - AO353_02715 0.90 +1.1 578,530 + -0.0 578,607 + AO353_02720 0.12 -1.0 578,726 - AO353_02720 0.25 -0.9 578,726 - AO353_02720 0.25 -0.9 578,726 - AO353_02720 0.25 +0.6 578,726 - AO353_02720 0.25 -0.2 578,740 + AO353_02720 0.27 -1.2 578,740 + AO353_02720 0.27 -1.8 578,740 + AO353_02720 0.27 -1.0 578,740 + AO353_02720 0.27 -0.3 578,740 + AO353_02720 0.27 -0.0 578,741 - AO353_02720 0.27 -1.4 578,741 - AO353_02720 0.27 +0.4 578,833 + AO353_02720 0.37 +0.6 578,888 + AO353_02720 0.43 -2.0 578,889 - AO353_02720 0.44 +0.6 578,889 - AO353_02720 0.44 -1.5 578,935 + AO353_02720 0.49 +0.1 578,936 - AO353_02720 0.49 +0.2 578,936 - AO353_02720 0.49 -1.8 578,936 - AO353_02720 0.49 +0.3 578,936 - AO353_02720 0.49 +0.2 578,936 - AO353_02720 0.49 -1.4 579,284 + AO353_02720 0.87 -1.6 579,386 - -0.4 579,404 - -1.9 579,436 + -0.0 579,436 + -1.4 579,437 - -0.6 579,496 - +0.1 579,598 - -0.3 579,610 + -0.0 579,629 + +1.0 579,629 + -0.0 579,630 - +0.1 579,630 - -1.2 579,630 - +0.6 579,630 - -0.3 579,773 + AO353_02725 0.24 -0.0 579,773 + AO353_02725 0.24 +0.6 579,773 + AO353_02725 0.24 +1.6 579,773 + AO353_02725 0.24 -1.5 579,773 + AO353_02725 0.24 -0.5 579,773 + AO353_02725 0.24 +0.6 579,773 + AO353_02725 0.24 +1.0 579,773 + AO353_02725 0.24 +0.3 579,773 + AO353_02725 0.24 -0.0 579,774 - AO353_02725 0.24 -0.3 579,774 - AO353_02725 0.24 -0.2 579,774 - AO353_02725 0.24 +0.9 579,774 - AO353_02725 0.24 -0.4 579,774 - AO353_02725 0.24 -0.0 579,774 - AO353_02725 0.24 -0.4 579,774 - AO353_02725 0.24 -0.0 579,774 - AO353_02725 0.24 +2.4 579,774 - AO353_02725 0.24 -0.1 579,774 - AO353_02725 0.24 +0.9 579,774 - AO353_02725 0.24 +0.8 579,774 - AO353_02725 0.24 -0.3 579,774 - AO353_02725 0.24 +0.1 579,774 - AO353_02725 0.24 +0.3 579,832 + AO353_02725 0.32 -1.2 579,832 + AO353_02725 0.32 +1.6 579,832 + AO353_02725 0.32 +1.6 579,833 - AO353_02725 0.32 -0.9 579,833 - AO353_02725 0.32 +0.4 579,833 - AO353_02725 0.32 -2.3 579,833 - AO353_02725 0.32 +1.0 579,929 + AO353_02725 0.46 +0.1 579,929 + AO353_02725 0.46 +0.7 579,929 + AO353_02725 0.46 -0.6 579,929 + AO353_02725 0.46 -0.6 579,929 + AO353_02725 0.46 -0.4 579,929 + AO353_02725 0.46 -0.6 579,929 + AO353_02725 0.46 +0.3 579,930 - AO353_02725 0.47 -0.6 579,930 - AO353_02725 0.47 -0.2 579,930 - AO353_02725 0.47 +0.7 580,003 + AO353_02725 0.57 +0.2 580,004 - AO353_02725 0.57 +0.6 580,041 + AO353_02725 0.63 +0.5 580,041 + AO353_02725 0.63 -0.2 580,041 + AO353_02725 0.63 -1.9 580,042 - AO353_02725 0.63 -1.4 580,110 + AO353_02725 0.73 -0.0 580,111 - AO353_02725 0.73 -0.9 580,111 - AO353_02725 0.73 +0.9 580,111 - AO353_02725 0.73 +0.3 580,155 + AO353_02725 0.79 +0.2 580,155 + AO353_02725 0.79 +0.6 580,155 + AO353_02725 0.79 +0.2 580,156 - AO353_02725 0.79 -0.0 580,156 - AO353_02725 0.79 -0.2 580,236 + +0.2 580,363 + -2.0 580,363 + +0.4 580,363 + +0.6 580,363 + -0.3 580,363 + -0.6 580,363 + -0.1 580,363 + -0.2 580,363 + +0.9 580,363 + +0.8 580,363 + -0.0 580,363 + -1.0 580,363 + +1.6 580,363 + -1.2 580,363 + +1.6 580,363 + -0.2 580,363 + +0.8 580,363 + +1.4 580,364 - +0.6 580,364 - -0.8 580,364 - +0.3 580,364 - +0.6 580,364 - -1.2 580,364 - +0.7 580,364 - -0.8 580,364 - +1.6 580,364 - +0.6 580,364 - +1.3 580,364 - +0.2 580,367 + -0.1 580,367 + +0.6 580,367 + +2.4 580,367 + -1.0 580,367 + -0.3 580,367 + +0.6 580,368 - +0.6 580,368 - -0.4 580,368 - +0.8 580,368 - +0.3 580,368 - -0.5
Or see this region's nucleotide sequence