Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00990 and AO353_00995 are separated by 94 nucleotides AO353_00995 and AO353_01000 are separated by 66 nucleotides AO353_01000 and AO353_01005 are separated by 150 nucleotides
AO353_00990: AO353_00990 - hypothetical protein, at 220,995 to 221,984
_00990
AO353_00995: AO353_00995 - LysR family transcriptional regulator, at 222,079 to 222,984
_00995
AO353_01000: AO353_01000 - hypothetical protein, at 223,051 to 223,629
_01000
AO353_01005: AO353_01005 - hypothetical protein, at 223,780 to 224,115
_01005
Position (kb) 222
223 Strain fitness (log2 ratio) -2
-1
0
1
2 at 221.139 kb on + strand, within AO353_00990 at 221.139 kb on + strand, within AO353_00990 at 221.140 kb on - strand, within AO353_00990 at 221.140 kb on - strand, within AO353_00990 at 221.143 kb on + strand, within AO353_00990 at 221.143 kb on + strand, within AO353_00990 at 221.264 kb on + strand, within AO353_00990 at 221.264 kb on + strand, within AO353_00990 at 221.309 kb on + strand, within AO353_00990 at 221.309 kb on + strand, within AO353_00990 at 221.310 kb on - strand, within AO353_00990 at 221.310 kb on - strand, within AO353_00990 at 221.386 kb on + strand, within AO353_00990 at 221.386 kb on + strand, within AO353_00990 at 221.386 kb on + strand, within AO353_00990 at 221.386 kb on + strand, within AO353_00990 at 221.651 kb on + strand, within AO353_00990 at 221.652 kb on - strand, within AO353_00990 at 221.652 kb on - strand, within AO353_00990 at 221.653 kb on + strand, within AO353_00990 at 221.653 kb on + strand, within AO353_00990 at 221.653 kb on + strand, within AO353_00990 at 221.653 kb on + strand, within AO353_00990 at 221.654 kb on - strand, within AO353_00990 at 221.654 kb on - strand, within AO353_00990 at 221.654 kb on - strand, within AO353_00990 at 221.886 kb on + strand at 221.886 kb on + strand at 221.961 kb on + strand at 221.962 kb on - strand at 221.972 kb on + strand at 221.972 kb on + strand at 221.973 kb on - strand at 221.973 kb on - strand at 221.973 kb on - strand at 221.973 kb on - strand at 222.002 kb on + strand at 222.003 kb on - strand at 222.004 kb on + strand at 222.004 kb on + strand at 222.004 kb on + strand at 222.004 kb on + strand at 222.004 kb on + strand at 222.005 kb on - strand at 222.005 kb on - strand at 222.005 kb on - strand at 222.005 kb on - strand at 222.005 kb on - strand at 222.005 kb on - strand at 222.036 kb on + strand at 222.036 kb on + strand at 222.036 kb on + strand at 222.036 kb on + strand at 222.037 kb on - strand at 222.037 kb on - strand at 222.037 kb on - strand at 222.040 kb on + strand at 222.041 kb on - strand at 222.041 kb on - strand at 222.066 kb on + strand at 222.067 kb on - strand at 222.068 kb on + strand at 222.068 kb on + strand at 222.068 kb on + strand at 222.068 kb on + strand at 222.068 kb on + strand at 222.069 kb on - strand at 222.069 kb on - strand at 222.069 kb on - strand at 222.069 kb on - strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.074 kb on + strand at 222.075 kb on - strand at 222.075 kb on - strand at 222.075 kb on - strand at 222.075 kb on - strand at 222.075 kb on - strand at 222.091 kb on - strand at 222.235 kb on - strand, within AO353_00995 at 222.235 kb on - strand, within AO353_00995 at 222.309 kb on + strand, within AO353_00995 at 222.309 kb on + strand, within AO353_00995 at 222.310 kb on - strand, within AO353_00995 at 222.310 kb on - strand, within AO353_00995 at 222.310 kb on - strand, within AO353_00995 at 222.356 kb on + strand, within AO353_00995 at 222.356 kb on + strand, within AO353_00995 at 222.356 kb on + strand, within AO353_00995 at 222.356 kb on + strand, within AO353_00995 at 222.356 kb on + strand, within AO353_00995 at 222.357 kb on - strand, within AO353_00995 at 222.357 kb on - strand, within AO353_00995 at 222.357 kb on - strand, within AO353_00995 at 222.372 kb on + strand, within AO353_00995 at 222.404 kb on + strand, within AO353_00995 at 222.404 kb on + strand, within AO353_00995 at 222.404 kb on + strand, within AO353_00995 at 222.405 kb on - strand, within AO353_00995 at 222.405 kb on - strand, within AO353_00995 at 222.405 kb on - strand, within AO353_00995 at 222.449 kb on + strand, within AO353_00995 at 222.450 kb on - strand, within AO353_00995 at 222.455 kb on + strand, within AO353_00995 at 222.455 kb on + strand, within AO353_00995 at 222.465 kb on - strand, within AO353_00995 at 222.465 kb on - strand, within AO353_00995 at 222.582 kb on - strand, within AO353_00995 at 222.582 kb on - strand, within AO353_00995 at 222.582 kb on - strand, within AO353_00995 at 222.598 kb on + strand, within AO353_00995 at 222.598 kb on + strand, within AO353_00995 at 222.599 kb on - strand, within AO353_00995 at 222.690 kb on + strand, within AO353_00995 at 222.691 kb on - strand, within AO353_00995 at 222.770 kb on + strand, within AO353_00995 at 222.771 kb on - strand, within AO353_00995 at 222.904 kb on - strand at 222.955 kb on + strand at 222.955 kb on + strand at 222.955 kb on + strand at 222.955 kb on + strand at 222.955 kb on + strand at 222.956 kb on - strand at 222.956 kb on - strand at 222.956 kb on - strand at 222.956 kb on - strand at 222.988 kb on - strand at 222.988 kb on - strand at 223.026 kb on + strand at 223.026 kb on + strand at 223.026 kb on + strand at 223.027 kb on - strand at 223.027 kb on - strand at 223.148 kb on + strand, within AO353_01000 at 223.195 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.282 kb on + strand, within AO353_01000 at 223.283 kb on - strand at 223.285 kb on + strand, within AO353_01000 at 223.285 kb on + strand, within AO353_01000 at 223.285 kb on + strand, within AO353_01000 at 223.357 kb on + strand, within AO353_01000 at 223.357 kb on + strand, within AO353_01000 at 223.357 kb on + strand, within AO353_01000 at 223.358 kb on - strand, within AO353_01000 at 223.358 kb on - strand, within AO353_01000 at 223.378 kb on + strand, within AO353_01000 at 223.379 kb on - strand, within AO353_01000 at 223.549 kb on - strand, within AO353_01000 at 223.549 kb on - strand, within AO353_01000 at 223.549 kb on - strand, within AO353_01000 at 223.573 kb on + strand at 223.573 kb on + strand at 223.574 kb on - strand at 223.590 kb on + strand at 223.625 kb on + strand at 223.625 kb on + strand at 223.625 kb on + strand at 223.625 kb on + strand at 223.625 kb on + strand at 223.626 kb on - strand at 223.626 kb on - strand at 223.626 kb on - strand at 223.626 kb on - strand at 223.626 kb on - strand at 223.634 kb on - strand at 223.697 kb on + strand at 223.697 kb on + strand at 223.781 kb on + strand at 223.781 kb on + strand at 223.781 kb on + strand at 223.781 kb on + strand at 223.781 kb on + strand at 223.782 kb on - strand at 223.782 kb on - strand at 223.782 kb on - strand at 223.841 kb on + strand, within AO353_01005 at 223.841 kb on + strand, within AO353_01005 at 223.841 kb on + strand, within AO353_01005 at 223.841 kb on + strand, within AO353_01005 at 223.841 kb on + strand, within AO353_01005 at 223.841 kb on + strand, within AO353_01005 at 223.849 kb on + strand, within AO353_01005 at 223.868 kb on + strand, within AO353_01005 at 223.869 kb on - strand, within AO353_01005 at 223.869 kb on - strand, within AO353_01005 at 223.869 kb on - strand, within AO353_01005 at 223.917 kb on + strand, within AO353_01005 at 223.917 kb on + strand, within AO353_01005 at 223.917 kb on + strand, within AO353_01005 at 223.917 kb on + strand, within AO353_01005 at 223.941 kb on + strand, within AO353_01005 at 223.941 kb on + strand, within AO353_01005 at 223.941 kb on + strand, within AO353_01005 at 223.942 kb on - strand, within AO353_01005 at 223.942 kb on - strand, within AO353_01005 at 223.942 kb on - strand, within AO353_01005 at 223.956 kb on + strand, within AO353_01005 at 223.957 kb on - strand, within AO353_01005 at 223.957 kb on - strand, within AO353_01005 at 223.957 kb on - strand, within AO353_01005 at 223.957 kb on - strand, within AO353_01005 at 223.957 kb on - strand, within AO353_01005
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 221,139 + AO353_00990 0.15 -0.9 221,139 + AO353_00990 0.15 +0.0 221,140 - AO353_00990 0.15 -0.2 221,140 - AO353_00990 0.15 -0.3 221,143 + AO353_00990 0.15 -0.5 221,143 + AO353_00990 0.15 +0.2 221,264 + AO353_00990 0.27 -0.3 221,264 + AO353_00990 0.27 -0.2 221,309 + AO353_00990 0.32 -0.3 221,309 + AO353_00990 0.32 -0.7 221,310 - AO353_00990 0.32 +0.3 221,310 - AO353_00990 0.32 +0.8 221,386 + AO353_00990 0.39 -2.3 221,386 + AO353_00990 0.39 -0.5 221,386 + AO353_00990 0.39 +0.5 221,386 + AO353_00990 0.39 -0.8 221,651 + AO353_00990 0.66 -0.0 221,652 - AO353_00990 0.66 +0.5 221,652 - AO353_00990 0.66 +0.1 221,653 + AO353_00990 0.66 +0.9 221,653 + AO353_00990 0.66 -0.2 221,653 + AO353_00990 0.66 -0.5 221,653 + AO353_00990 0.66 +2.1 221,654 - AO353_00990 0.67 +1.5 221,654 - AO353_00990 0.67 +0.6 221,654 - AO353_00990 0.67 -0.5 221,886 + +0.1 221,886 + -1.2 221,961 + +0.9 221,962 - -0.3 221,972 + -0.5 221,972 + -0.9 221,973 - +0.1 221,973 - -1.0 221,973 - -1.1 221,973 - -1.9 222,002 + +0.9 222,003 - +0.5 222,004 + -0.5 222,004 + -0.3 222,004 + -0.3 222,004 + -0.1 222,004 + +0.3 222,005 - +0.7 222,005 - +0.5 222,005 - -1.1 222,005 - -0.3 222,005 - +0.5 222,005 - -0.1 222,036 + -1.9 222,036 + +0.5 222,036 + -0.3 222,036 + -0.9 222,037 - -0.9 222,037 - -0.4 222,037 - -0.5 222,040 + +1.1 222,041 - +1.3 222,041 - -1.5 222,066 + -0.4 222,067 - -0.3 222,068 + +0.4 222,068 + -0.3 222,068 + -1.3 222,068 + -0.1 222,068 + +0.3 222,069 - -0.5 222,069 - +0.3 222,069 - +0.3 222,069 - -0.5 222,074 + -0.4 222,074 + -0.9 222,074 + +0.1 222,074 + +0.2 222,074 + -0.5 222,074 + -0.1 222,074 + -0.4 222,074 + +0.2 222,075 - -1.9 222,075 - -0.4 222,075 - -0.1 222,075 - +1.5 222,075 - -1.2 222,091 - -0.5 222,235 - AO353_00995 0.17 +1.8 222,235 - AO353_00995 0.17 +0.9 222,309 + AO353_00995 0.25 +0.7 222,309 + AO353_00995 0.25 +0.5 222,310 - AO353_00995 0.25 +0.5 222,310 - AO353_00995 0.25 -0.1 222,310 - AO353_00995 0.25 -0.3 222,356 + AO353_00995 0.31 +0.5 222,356 + AO353_00995 0.31 -0.2 222,356 + AO353_00995 0.31 -1.0 222,356 + AO353_00995 0.31 +1.1 222,356 + AO353_00995 0.31 +0.5 222,357 - AO353_00995 0.31 +0.6 222,357 - AO353_00995 0.31 +0.7 222,357 - AO353_00995 0.31 +0.1 222,372 + AO353_00995 0.32 +0.7 222,404 + AO353_00995 0.36 -0.5 222,404 + AO353_00995 0.36 +0.1 222,404 + AO353_00995 0.36 +1.5 222,405 - AO353_00995 0.36 -0.4 222,405 - AO353_00995 0.36 -0.2 222,405 - AO353_00995 0.36 -0.1 222,449 + AO353_00995 0.41 +0.7 222,450 - AO353_00995 0.41 +1.1 222,455 + AO353_00995 0.42 +0.7 222,455 + AO353_00995 0.42 -0.2 222,465 - AO353_00995 0.43 +0.4 222,465 - AO353_00995 0.43 -0.9 222,582 - AO353_00995 0.56 -0.3 222,582 - AO353_00995 0.56 +2.2 222,582 - AO353_00995 0.56 -0.1 222,598 + AO353_00995 0.57 +0.1 222,598 + AO353_00995 0.57 -0.5 222,599 - AO353_00995 0.57 +1.5 222,690 + AO353_00995 0.67 -0.9 222,691 - AO353_00995 0.68 +0.6 222,770 + AO353_00995 0.76 -0.4 222,771 - AO353_00995 0.76 +0.5 222,904 - -0.6 222,955 + +0.8 222,955 + +0.4 222,955 + +0.5 222,955 + -0.5 222,955 + +0.5 222,956 - -0.1 222,956 - +0.9 222,956 - -0.1 222,956 - -0.5 222,988 - -0.5 222,988 - +0.1 223,026 + -0.0 223,026 + -0.1 223,026 + -1.0 223,027 - -0.4 223,027 - +0.3 223,148 + AO353_01000 0.17 +0.6 223,195 + AO353_01000 0.25 -0.5 223,282 + AO353_01000 0.40 +0.4 223,282 + AO353_01000 0.40 +1.5 223,282 + AO353_01000 0.40 -1.5 223,282 + AO353_01000 0.40 -0.5 223,282 + AO353_01000 0.40 +1.1 223,282 + AO353_01000 0.40 +1.5 223,282 + AO353_01000 0.40 -0.1 223,283 - +0.1 223,285 + AO353_01000 0.40 -0.2 223,285 + AO353_01000 0.40 +0.9 223,285 + AO353_01000 0.40 -0.1 223,357 + AO353_01000 0.53 +0.5 223,357 + AO353_01000 0.53 +0.0 223,357 + AO353_01000 0.53 -0.5 223,358 - AO353_01000 0.53 -0.2 223,358 - AO353_01000 0.53 +0.5 223,378 + AO353_01000 0.56 -0.5 223,379 - AO353_01000 0.57 -0.9 223,549 - AO353_01000 0.86 -0.2 223,549 - AO353_01000 0.86 -0.7 223,549 - AO353_01000 0.86 -0.5 223,573 + -0.0 223,573 + +0.2 223,574 - +0.0 223,590 + +0.2 223,625 + +1.2 223,625 + -0.8 223,625 + -1.1 223,625 + +1.5 223,625 + +1.3 223,626 - +0.9 223,626 - -0.5 223,626 - +0.1 223,626 - -1.3 223,626 - -1.1 223,634 - +0.3 223,697 + -0.8 223,697 + +0.2 223,781 + +0.2 223,781 + -0.7 223,781 + +0.2 223,781 + -0.4 223,781 + +0.2 223,782 - -0.1 223,782 - -0.0 223,782 - +0.5 223,841 + AO353_01005 0.18 -1.0 223,841 + AO353_01005 0.18 -0.3 223,841 + AO353_01005 0.18 -0.7 223,841 + AO353_01005 0.18 -0.6 223,841 + AO353_01005 0.18 -0.3 223,841 + AO353_01005 0.18 -0.1 223,849 + AO353_01005 0.21 +0.5 223,868 + AO353_01005 0.26 +0.1 223,869 - AO353_01005 0.26 +1.6 223,869 - AO353_01005 0.26 -0.5 223,869 - AO353_01005 0.26 -0.3 223,917 + AO353_01005 0.41 +0.5 223,917 + AO353_01005 0.41 -1.3 223,917 + AO353_01005 0.41 -0.0 223,917 + AO353_01005 0.41 -1.3 223,941 + AO353_01005 0.48 -0.3 223,941 + AO353_01005 0.48 +0.4 223,941 + AO353_01005 0.48 -0.5 223,942 - AO353_01005 0.48 -0.2 223,942 - AO353_01005 0.48 -0.1 223,942 - AO353_01005 0.48 -0.3 223,956 + AO353_01005 0.52 -0.0 223,957 - AO353_01005 0.53 -0.2 223,957 - AO353_01005 0.53 -0.4 223,957 - AO353_01005 0.53 -1.2 223,957 - AO353_01005 0.53 +1.2 223,957 - AO353_01005 0.53 +0.2
Or see this region's nucleotide sequence