Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2734

Experiment: L-Isoleucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_2733 and Shewana3_2734 are separated by 59 nucleotidesShewana3_2734 and Shewana3_2735 are separated by 199 nucleotidesShewana3_2735 and Shewana3_2736 are separated by 60 nucleotides Shewana3_2733: Shewana3_2733 - phosphate ABC transporter, inner membrane subunit PstA (RefSeq), at 3,262,841 to 3,264,499 _2733 Shewana3_2734: Shewana3_2734 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,264,559 to 3,266,817 _2734 Shewana3_2735: Shewana3_2735 - ACT domain-containing protein (RefSeq), at 3,267,017 to 3,267,517 _2735 Shewana3_2736: Shewana3_2736 - hypothetical protein (RefSeq), at 3,267,578 to 3,268,465 _2736 Position (kb) 3264 3265 3266 3267Strain fitness (log2 ratio) -2 -1 0 1 2at 3263.689 kb on - strand, within Shewana3_2733at 3264.201 kb on - strand, within Shewana3_2733at 3264.576 kb on - strandat 3264.668 kb on - strandat 3264.743 kb on - strandat 3264.772 kb on - strandat 3265.256 kb on - strandat 3265.573 kb on - strand, within Shewana3_2734at 3266.797 kb on - strandat 3267.114 kb on + strand, within Shewana3_2735at 3267.114 kb on + strand, within Shewana3_2735at 3267.122 kb on - strand, within Shewana3_2735at 3267.122 kb on - strand, within Shewana3_2735at 3267.122 kb on - strand, within Shewana3_2735at 3267.219 kb on + strand, within Shewana3_2735at 3267.290 kb on - strand, within Shewana3_2735at 3267.381 kb on - strand, within Shewana3_2735at 3267.389 kb on - strand, within Shewana3_2735at 3267.416 kb on + strand, within Shewana3_2735at 3267.446 kb on - strand, within Shewana3_2735at 3267.461 kb on + strand, within Shewana3_2735at 3267.679 kb on + strand, within Shewana3_2736at 3267.679 kb on + strand, within Shewana3_2736at 3267.679 kb on + strand, within Shewana3_2736at 3267.687 kb on - strand, within Shewana3_2736at 3267.687 kb on - strand, within Shewana3_2736at 3267.795 kb on + strand, within Shewana3_2736at 3267.803 kb on - strand, within Shewana3_2736

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine (N)
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3,263,689 - Shewana3_2733 0.51 -0.8
3,264,201 - Shewana3_2733 0.82 +0.7
3,264,576 - +0.1
3,264,668 - -0.2
3,264,743 - -1.2
3,264,772 - +0.9
3,265,256 - -0.7
3,265,573 - Shewana3_2734 0.45 -0.7
3,266,797 - -0.1
3,267,114 + Shewana3_2735 0.19 +0.8
3,267,114 + Shewana3_2735 0.19 +1.8
3,267,122 - Shewana3_2735 0.21 -1.2
3,267,122 - Shewana3_2735 0.21 -0.0
3,267,122 - Shewana3_2735 0.21 -0.6
3,267,219 + Shewana3_2735 0.40 -0.8
3,267,290 - Shewana3_2735 0.54 +0.4
3,267,381 - Shewana3_2735 0.73 +0.1
3,267,389 - Shewana3_2735 0.74 -0.8
3,267,416 + Shewana3_2735 0.80 -1.5
3,267,446 - Shewana3_2735 0.86 +0.5
3,267,461 + Shewana3_2735 0.89 -1.8
3,267,679 + Shewana3_2736 0.11 +0.7
3,267,679 + Shewana3_2736 0.11 +0.5
3,267,679 + Shewana3_2736 0.11 +0.2
3,267,687 - Shewana3_2736 0.12 +0.4
3,267,687 - Shewana3_2736 0.12 +0.9
3,267,795 + Shewana3_2736 0.24 +0.4
3,267,803 - Shewana3_2736 0.25 +0.0

Or see this region's nucleotide sequence