Strain Fitness in Shewanella loihica PV-4 around Shew_3779

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
4,497,769	+				+1.2
4,497,845	+				-2.6
4,498,001	-		Shew_3778	0.18	+1.0
4,498,001	-		Shew_3778	0.18	+0.3
4,498,026	-		Shew_3778	0.21	-1.0
4,498,066	+		Shew_3778	0.26	-1.8
4,498,190	+		Shew_3778	0.41	+0.1
4,498,247	+		Shew_3778	0.47	-0.3
4,498,270	+		Shew_3778	0.50	-1.4
4,498,281	-		Shew_3778	0.51	+0.8
4,498,296	-		Shew_3778	0.53	+0.1
4,498,388	-		Shew_3778	0.64	-0.0
4,498,397	+		Shew_3778	0.65	-0.1
4,498,876	+		Shew_3779	0.45	-1.2
4,498,885	-		Shew_3779	0.48	+0.0
4,499,339	+				+0.9
4,499,432	+		Shew_3780	0.15	+0.0
4,499,854	+		Shew_3780	0.42	-0.5
4,499,928	-		Shew_3780	0.47	+0.7
4,499,933	+		Shew_3780	0.47	-3.2
4,500,064	+		Shew_3780	0.56	+0.4