Strain Fitness in Shewanella loihica PV-4 around Shew_3745

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
4,460,380	-				+0.1
4,460,527	-				+0.5
4,460,576	+				+0.4
4,460,576	+				+1.4
4,460,584	-				+0.0
4,460,655	+				+0.8
4,460,655	+				+0.1
4,460,655	+				-0.1
4,460,655	+				+0.0
4,460,655	+				+0.6
4,460,655	+				-1.8
4,460,655	+				-2.6
4,460,655	+				+1.5
4,460,655	+				+0.5
4,460,655	+				+0.8
4,460,655	+				-0.3
4,460,655	+				+1.0
4,460,655	+				-1.0
4,460,655	+				+0.7
4,460,655	+				+0.3
4,460,663	-				+1.0
4,460,663	-				+1.1
4,460,663	-				+2.0
4,460,663	-				+0.5
4,460,663	-				-0.4
4,460,663	-				+0.9
4,460,663	-				-0.1
4,460,991	+				+0.3
4,460,999	-				+1.1
4,461,311	-		Shew_3745	0.15	+0.4
4,461,318	+		Shew_3745	0.15	+1.0
4,461,876	-		Shew_3745	0.40	+0.4
4,461,876	-		Shew_3745	0.40	-0.1
4,461,881	-		Shew_3745	0.40	+0.7
4,461,881	-		Shew_3745	0.40	+0.3
4,462,027	+		Shew_3745	0.47	+0.3
4,462,035	-		Shew_3745	0.47	+0.0
4,462,141	+		Shew_3745	0.52	+0.8
4,462,149	-		Shew_3745	0.53	+1.7
4,462,152	+		Shew_3745	0.53	-2.8
4,462,157	+		Shew_3745	0.53	+2.2
4,462,427	+		Shew_3745	0.65	+0.7
4,462,527	-		Shew_3745	0.70	+0.2
4,462,573	-		Shew_3745	0.72	+0.7
4,462,842	+		Shew_3745	0.84	+1.7
4,462,842	+		Shew_3745	0.84	+0.2
4,462,920	-		Shew_3745	0.87	+0.1
4,462,984	+				+0.1
4,463,039	+				-0.2
4,463,074	-				-0.3
4,463,092	-				+0.2
4,463,108	+				-0.7
4,463,372	-				+1.4
4,463,380	+				+1.4
4,463,472	-		Shew_3746	0.11	+0.3
4,463,532	+		Shew_3746	0.22	+0.4
4,463,550	-		Shew_3746	0.25	+0.5
4,463,780	+		Shew_3746	0.63	+0.6