Strain Fitness in Shewanella loihica PV-4 around Shew_3430

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
4,094,112	+				+2.4
4,094,767	-		Shew_3430	0.44	+0.0
4,095,353	+		Shew_3430	0.74	+1.6
4,095,487	-		Shew_3430	0.80	+0.7
4,096,068	+				+2.4
4,096,070	+				+2.4
4,096,365	+	aceE	Shew_3431	0.18	+2.4
4,096,365	+	aceE	Shew_3431	0.18	+1.8
4,096,371	+	aceE	Shew_3431	0.18	+2.9
4,096,373	-	aceE	Shew_3431	0.18	+2.9
4,096,557	+	aceE	Shew_3431	0.25	+2.9
4,096,575	-	aceE	Shew_3431	0.26	+2.3
4,096,625	+	aceE	Shew_3431	0.28	+1.3
4,096,656	-	aceE	Shew_3431	0.29	+2.5
4,096,866	-	aceE	Shew_3431	0.37	+3.0