Strain Fitness in Shewanella loihica PV-4 around Shew_3414

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
4,065,837	+		Shew_3413	0.87	+0.0
4,065,885	+				-0.0
4,066,088	+				+0.3
4,066,292	+				+0.2
4,066,331	-				-0.3
4,066,331	-				+2.1
4,066,362	+				+0.8
4,066,370	-				+0.5
4,066,370	-				+0.9
4,066,540	+				+1.9
4,066,603	+		Shew_3414	0.10	-0.0
4,066,808	+		Shew_3414	0.17	+0.4
4,066,824	+		Shew_3414	0.18	+0.3
4,066,824	+		Shew_3414	0.18	+0.1
4,067,042	+		Shew_3414	0.25	+0.6
4,067,255	+		Shew_3414	0.32	+0.6
4,067,285	-		Shew_3414	0.33	+0.5
4,067,430	-		Shew_3414	0.38	-1.7
4,067,535	+		Shew_3414	0.41	-0.1
4,067,653	+		Shew_3414	0.45	-0.2
4,068,280	+		Shew_3414	0.66	+1.2
4,068,280	+		Shew_3414	0.66	+0.1
4,068,415	+		Shew_3414	0.70	+0.7
4,068,423	-		Shew_3414	0.71	+1.3
4,068,444	-		Shew_3414	0.71	+0.9
4,068,462	+		Shew_3414	0.72	-0.0
4,068,747	+		Shew_3414	0.82	+2.3
4,068,755	-		Shew_3414	0.82	+0.1
4,068,805	-		Shew_3414	0.83	+0.7
4,068,819	+		Shew_3414	0.84	+0.1
4,068,915	+		Shew_3414	0.87	+0.1
4,068,923	-		Shew_3414	0.87	+0.2
4,068,947	-		Shew_3414	0.88	+0.4
4,068,997	-		Shew_3414	0.90	+0.3
4,068,999	+		Shew_3414	0.90	+0.0
4,069,188	-				-0.0
4,069,314	-				+0.3
4,069,314	-				+0.3
4,069,331	+				+0.5
4,069,382	+				+0.5
4,069,461	-				-0.0
4,069,476	-				+0.2
4,069,476	-				+0.1
4,069,503	+		Shew_3415	0.12	+0.9
4,069,511	-		Shew_3415	0.13	+0.1
4,069,511	-		Shew_3415	0.13	+0.2
4,069,522	+		Shew_3415	0.14	+0.0
4,069,593	+		Shew_3415	0.23	+1.0
4,069,857	-		Shew_3415	0.56	-0.0
4,069,858	+		Shew_3415	0.56	+0.8
4,070,004	-		Shew_3415	0.74	+0.3
4,070,077	+		Shew_3415	0.83	-0.2
4,070,178	+				-0.2
4,070,230	-				+0.3