Strain Fitness in Shewanella loihica PV-4 around Shew_3151

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
3,744,975	-		Shew_3150	0.41	-0.8
3,745,060	-		Shew_3150	0.70	+1.8
3,745,142	+				+1.8
3,745,195	-				+0.6
3,745,697	+				-0.3
3,745,918	+				+1.1
3,745,926	-				+2.8
3,745,988	+				+1.1
3,746,076	+		Shew_3151	0.13	+0.4
3,746,094	+		Shew_3151	0.13	+0.1
3,746,108	-		Shew_3151	0.14	+0.1
3,746,256	+		Shew_3151	0.18	+0.2
3,746,256	+		Shew_3151	0.18	+0.5
3,746,256	+		Shew_3151	0.18	+1.4
3,746,557	-		Shew_3151	0.28	+0.8
3,746,600	-		Shew_3151	0.29	+1.6
3,746,600	-		Shew_3151	0.29	+0.2
3,746,609	-		Shew_3151	0.29	+1.1
3,746,681	+		Shew_3151	0.32	-0.5
3,746,999	+		Shew_3151	0.42	+0.6
3,747,173	+		Shew_3151	0.47	+1.2
3,747,206	+		Shew_3151	0.48	+0.1
3,747,406	+		Shew_3151	0.54	+0.3
3,747,606	+		Shew_3151	0.61	+0.1
3,747,606	+		Shew_3151	0.61	+0.2
3,747,613	-		Shew_3151	0.61	+0.3
3,747,664	-		Shew_3151	0.62	+0.5
3,747,834	+		Shew_3151	0.68	+0.4
3,747,839	+		Shew_3151	0.68	+0.5
3,747,893	-		Shew_3151	0.70	+2.1
3,748,024	-		Shew_3151	0.74	+0.2
3,748,105	+		Shew_3151	0.76	+0.0
3,748,105	+		Shew_3151	0.76	+1.1
3,748,120	-		Shew_3151	0.77	-0.0
3,748,279	-		Shew_3151	0.82	-0.1
3,748,460	-		Shew_3151	0.87	+0.5
3,748,532	-		Shew_3151	0.90	-0.0
3,748,686	-				+0.5
3,748,765	-				+0.4
3,749,118	-				+0.4
3,749,137	+				+1.7
3,749,145	-				+0.7
3,749,145	-				-1.2
3,749,145	-				+2.6
3,749,189	+				+2.0
3,749,464	-				+0.2
3,749,651	-		Shew_3152	0.13	-0.5
3,749,834	-		Shew_3152	0.16	-0.4