Strain Fitness in Shewanella loihica PV-4 around Shew_3136

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
3,728,238	+		Shew_3135	0.45	-0.2
3,728,320	+		Shew_3135	0.50	+0.1
3,728,330	+		Shew_3135	0.50	+0.1
3,728,411	+		Shew_3135	0.55	-0.0
3,728,500	-		Shew_3135	0.60	+0.5
3,729,098	+				+0.5
3,729,150	-				+0.6
3,729,644	-		Shew_3136	0.15	-0.2
3,729,685	+		Shew_3136	0.17	+0.3
3,729,685	+		Shew_3136	0.17	-0.3
3,729,685	+		Shew_3136	0.17	-0.2
3,729,754	+		Shew_3136	0.19	-1.6
3,729,785	+		Shew_3136	0.20	+0.2
3,729,850	-		Shew_3136	0.23	-0.4
3,729,981	-		Shew_3136	0.27	+0.5
3,730,006	-		Shew_3136	0.28	-0.3
3,730,335	+		Shew_3136	0.40	+0.5
3,730,349	+		Shew_3136	0.40	-0.0
3,730,357	-		Shew_3136	0.41	-1.7
3,730,485	+		Shew_3136	0.45	+0.2
3,730,513	-		Shew_3136	0.46	-0.3
3,730,513	-		Shew_3136	0.46	+0.4
3,730,632	+		Shew_3136	0.50	-0.2
3,730,846	-		Shew_3136	0.58	-0.7
3,730,878	-		Shew_3136	0.59	-0.0
3,730,928	-		Shew_3136	0.61	-0.1
3,730,999	+		Shew_3136	0.64	-0.8
3,731,076	+		Shew_3136	0.66	+0.0
3,731,604	+		Shew_3136	0.85	-0.3
3,731,612	-		Shew_3136	0.85	+0.4
3,731,717	-		Shew_3136	0.89	+0.0
3,732,234	+				-0.5
3,732,314	+				-0.5
3,732,586	-		Shew_3137	0.35	+0.1
3,732,688	+		Shew_3137	0.53	+0.5
3,732,815	+		Shew_3137	0.76	-0.2