Strain Fitness in Shewanella loihica PV-4 around Shew_3013

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
3,577,152	-				+1.5
3,577,308	-				+0.1
3,578,093	+				+0.6
3,578,208	+		Shew_3013	0.15	+0.3
3,578,216	-		Shew_3013	0.16	+0.2
3,578,395	-		Shew_3013	0.28	+0.6
3,578,472	+		Shew_3013	0.33	-0.1
3,578,488	+		Shew_3013	0.34	+0.1
3,578,498	-		Shew_3013	0.35	+0.7
3,578,698	+		Shew_3013	0.48	+0.8
3,578,738	-		Shew_3013	0.51	+0.6
3,579,521	-				+0.6
3,579,587	-				-0.6
3,579,747	+		Shew_3014	0.24	+0.0
3,579,981	+		Shew_3014	0.45	+0.1
3,580,136	-		Shew_3014	0.59	+0.4
3,580,185	-		Shew_3014	0.64	+0.5
3,580,243	-		Shew_3014	0.69	-0.9
3,580,440	+		Shew_3014	0.87	+0.1
3,580,448	-		Shew_3014	0.87	+0.0
3,580,464	-		Shew_3014	0.89	+0.4