Strain Fitness in Shewanella loihica PV-4 around Shew_2701

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
3,195,290	-				-0.2
3,195,338	-				+0.2
3,195,338	-				-0.5
3,195,338	-				+0.4
3,195,359	+				+0.3
3,195,407	-				+0.1
3,195,492	-		Shew_2700	0.30	-0.3
3,195,702	+		Shew_2700	0.84	+0.1
3,196,175	-		Shew_2701	0.31	+0.1
3,196,272	+		Shew_2701	0.40	+1.5
3,196,547	-		Shew_2701	0.66	+0.1
3,196,604	-		Shew_2701	0.71	+1.1
3,196,945	+				+0.3
3,196,961	+				+0.3
3,197,295	+				-0.3
3,197,683	-		Shew_2702	0.25	-0.7
3,197,693	-		Shew_2702	0.26	+0.1
3,197,693	-		Shew_2702	0.26	+0.7
3,197,806	-		Shew_2702	0.41	+0.3