Strain Fitness in Shewanella loihica PV-4 around Shew_2666

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
3,147,361	+				+0.9
3,147,361	+				+1.0
3,147,369	-				+0.5
3,147,409	+				+0.7
3,147,409	+				+1.0
3,147,417	-				+0.7
3,147,427	+				+0.5
3,147,435	-				+0.6
3,147,693	-				+1.2
3,147,735	+				+1.8
3,147,735	+				+1.2
3,147,743	-				-0.5
3,148,261	+				+1.3
3,148,435	-		Shew_2666	0.17	+1.5
3,148,435	-		Shew_2666	0.17	+1.1
3,148,440	-		Shew_2666	0.17	+1.1
3,148,464	-		Shew_2666	0.18	+0.7
3,149,004	-		Shew_2666	0.43	+1.0
3,149,107	+		Shew_2666	0.48	+1.7
3,149,446	+		Shew_2666	0.64	+1.1
3,149,458	+		Shew_2666	0.64	+1.7
3,149,717	-		Shew_2666	0.76	+1.1
3,150,078	-				+1.1
3,150,309	+				+1.1
3,150,317	-				+2.3
3,150,440	-				+1.5
3,150,595	+				+1.5
3,150,595	+				+1.1
3,150,605	+				+0.2
3,150,782	+				+0.6
3,150,846	-		Shew_2667	0.11	+1.4