Strain Fitness in Shewanella loihica PV-4 around Shew_2432
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,857,826 | - | Shew_2431 | 0.61 | -3.4 | |
2,857,958 | + | Shew_2431 | 0.67 | -0.4 | |
2,859,083 | - | Shew_2432 | 0.27 | -1.9 | |
2,859,233 | + | Shew_2432 | 0.37 | -2.9 | |
2,859,233 | + | Shew_2432 | 0.37 | +0.4 | |
2,859,350 | + | Shew_2432 | 0.44 | -1.0 | |
2,859,360 | + | Shew_2432 | 0.44 | -1.3 | |
2,859,368 | - | Shew_2432 | 0.45 | +1.1 | |
2,859,688 | - | Shew_2432 | 0.64 | -0.6 | |
2,859,876 | - | Shew_2432 | 0.76 | -1.0 | |
2,860,113 | - | -1.7 | |||
2,860,120 | - | -0.2 | |||
2,861,144 | + | Shew_2434 | 0.33 | -1.4 |
Or see this region's nucleotide sequence