Strain Fitness in Shewanella loihica PV-4 around Shew_1926
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,222,869 | - | Shew_1925 | 0.29 | +0.9 | |
| 2,222,883 | + | Shew_1925 | 0.30 | +0.7 | |
| 2,223,060 | - | Shew_1925 | 0.45 | +2.2 | |
| 2,223,096 | + | Shew_1925 | 0.48 | +1.5 | |
| 2,223,119 | + | Shew_1925 | 0.50 | +1.6 | |
| 2,223,127 | - | Shew_1925 | 0.51 | +2.2 | |
| 2,223,127 | - | Shew_1925 | 0.51 | +1.1 | |
| 2,223,334 | + | Shew_1925 | 0.68 | +0.6 | |
| 2,223,363 | + | Shew_1925 | 0.71 | +2.1 | |
| 2,223,831 | - | Shew_1926 | 0.12 | +2.7 | |
| 2,223,842 | - | Shew_1926 | 0.13 | +2.3 | |
| 2,224,075 | - | Shew_1926 | 0.37 | +1.2 |
Or see this region's nucleotide sequence