Strain Fitness in Shewanella loihica PV-4 around Shew_1784
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,040,312 | - | Shew_1783 | 0.11 | +0.3 | |
| 2,040,329 | - | Shew_1783 | 0.13 | +1.0 | |
| 2,040,552 | + | Shew_1783 | 0.34 | +0.9 | |
| 2,040,604 | - | Shew_1783 | 0.39 | -0.0 | |
| 2,040,721 | + | Shew_1783 | 0.50 | +0.1 | |
| 2,041,925 | + | Shew_1784 | 0.64 | +0.7 | |
| 2,042,345 | + | +0.6 | |||
| 2,042,540 | + | Shew_1785 | 0.31 | +0.3 | |
| 2,042,810 | - | Shew_1785 | 0.65 | +0.5 | |
| 2,042,819 | + | Shew_1785 | 0.66 | +0.0 | |
| 2,042,827 | - | Shew_1785 | 0.67 | -0.7 | |
| 2,043,082 | + | -0.3 |
Or see this region's nucleotide sequence