Strain Fitness in Shewanella loihica PV-4 around Shew_1753

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
2,004,451	+		Shew_1752	0.78	+0.3
2,004,451	+		Shew_1752	0.78	+0.8
2,004,517	-		Shew_1752	0.79	+0.1
2,004,581	+		Shew_1752	0.81	-0.9
2,004,589	-		Shew_1752	0.81	+0.1
2,004,644	-		Shew_1752	0.82	+0.8
2,004,705	+		Shew_1752	0.84	+0.1
2,004,940	+		Shew_1752	0.90	-2.8
2,004,948	-		Shew_1752	0.90	+0.5
2,004,950	+		Shew_1752	0.90	+0.1
2,005,027	+				-1.7
2,005,033	+				+0.9
2,005,082	-				+2.2
2,005,107	-				-0.7
2,005,172	-				+0.7
2,005,212	-				+0.3
2,005,223	-				+1.1
2,005,229	+				-0.4
2,005,242	-				-0.0
2,005,279	+				+0.6
2,005,286	-				+0.0
2,005,334	+				-0.9
2,005,412	-		Shew_1753	0.10	-0.1
2,005,414	+		Shew_1753	0.11	+0.3
2,005,414	+		Shew_1753	0.11	+1.3
2,005,414	+		Shew_1753	0.11	-0.0
2,005,414	+		Shew_1753	0.11	+0.7
2,005,414	+		Shew_1753	0.11	+0.6
2,005,414	+		Shew_1753	0.11	+0.5
2,005,414	+		Shew_1753	0.11	-0.1
2,005,422	+		Shew_1753	0.12	-0.7
2,005,422	+		Shew_1753	0.12	-0.0
2,005,422	-		Shew_1753	0.12	-0.1
2,005,422	+		Shew_1753	0.12	+0.0
2,005,445	-		Shew_1753	0.17	-0.1
2,005,585	+		Shew_1753	0.43	+1.5
2,005,603	-		Shew_1753	0.47	+0.5
2,005,630	+		Shew_1753	0.52	+0.7
2,005,638	-		Shew_1753	0.53	-0.1
2,005,638	-		Shew_1753	0.53	+1.6
2,005,638	-		Shew_1753	0.53	+0.2
2,005,709	-		Shew_1753	0.67	+0.1
2,005,709	-		Shew_1753	0.67	+2.1
2,005,841	+				+0.3
2,005,983	-				-0.4
2,005,983	-				-2.7
2,005,994	-				+0.8
2,006,040	+				+0.3
2,006,063	-				-0.1
2,006,063	-				-0.0
2,006,064	-				+0.2
2,006,260	+				+0.5
2,006,298	+				-0.1
2,006,364	+				+0.4
2,006,364	+				-0.4
2,006,387	+				-1.6
2,006,490	-		Shew_1754	0.54	+0.7
2,006,556	-				+0.8