Strain Fitness in Shewanella loihica PV-4 around Shew_1542

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,769,859	+		Shew_1541	0.54	+0.2
1,770,059	+		Shew_1541	0.78	+0.4
1,770,167	-				-0.3
1,770,183	+				+0.4
1,770,313	+				+0.2
1,770,403	+				-2.6
1,770,403	+				-0.3
1,770,905	+		Shew_1542	0.42	+0.4
1,771,010	+		Shew_1542	0.49	+1.8
1,771,072	+		Shew_1542	0.53	+0.2
1,771,080	-		Shew_1542	0.53	+1.7
1,771,563	-		Shew_1542	0.85	+0.7
1,771,839	-				-3.4
1,772,000	-		Shew_1543	0.17	-0.4
1,772,251	+		Shew_1543	0.41	+0.1
1,772,251	+		Shew_1543	0.41	+0.5
1,772,259	-		Shew_1543	0.42	+0.5
1,772,259	-		Shew_1543	0.42	-0.8
1,772,439	+		Shew_1543	0.59	-0.3
1,772,573	-		Shew_1543	0.72	+2.8
1,772,588	-		Shew_1543	0.73	+0.5
1,772,628	+		Shew_1543	0.77	-0.3
1,772,735	-		Shew_1543	0.87	-0.0