Strain Fitness in Shewanella loihica PV-4 around Shew_1536
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,763,670 | + | +1.0 | |||
1,763,718 | + | +0.8 | |||
1,764,012 | + | Shew_1535 | 0.54 | +1.0 | |
1,764,158 | + | Shew_1535 | 0.78 | +0.3 | |
1,764,213 | + | Shew_1535 | 0.87 | +1.0 | |
1,764,503 | - | Shew_1536 | 0.20 | -0.1 | |
1,764,805 | + | Shew_1536 | 0.68 | -0.1 | |
1,764,813 | - | Shew_1536 | 0.69 | +0.2 | |
1,765,487 | - | Shew_1537 | 0.12 | +1.0 | |
1,765,717 | - | Shew_1537 | 0.30 | +0.0 | |
1,765,864 | - | Shew_1537 | 0.42 | +0.7 |
Or see this region's nucleotide sequence