Strain Fitness in Shewanella loihica PV-4 around Shew_1467

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,688,809	-		Shew_1466	0.58	+0.5
1,688,969	+		Shew_1466	0.68	+0.3
1,689,287	-		Shew_1466	0.89	+0.9
1,689,303	+		Shew_1466	0.90	+0.8
1,689,311	-				+2.1
1,689,397	-				+0.4
1,689,700	+				-0.3
1,689,958	+		Shew_1467	0.15	+0.6
1,690,057	+		Shew_1467	0.20	-0.7
1,690,258	-		Shew_1467	0.29	+0.6
1,690,626	-		Shew_1467	0.46	+0.8
1,690,758	-		Shew_1467	0.52	+0.8
1,690,795	+		Shew_1467	0.54	+0.2
1,690,982	+		Shew_1467	0.63	+0.9
1,691,256	+		Shew_1467	0.75	-2.5
1,691,266	+		Shew_1467	0.76	+1.4
1,691,908	+				+0.5
1,691,908	+				-0.3
1,691,915	-				+0.0
1,691,947	+				+0.4
1,691,958	+				+0.8
1,692,201	+				+1.3
1,692,277	-				+0.3
1,692,277	-				+0.3
1,692,334	-				-0.1
1,692,338	+				+0.2
1,692,341	-				-0.8
1,692,343	+				-0.1
1,692,349	+				+1.1
1,692,362	+				-0.5
1,692,362	+				+0.2
1,692,362	+				+2.1
1,692,384	+				-0.5
1,692,485	-				+0.1
1,692,513	+				+0.4
1,692,513	+				+1.4
1,692,515	-				-0.3
1,692,521	-				-0.2
1,692,521	-				-0.3
1,692,521	-				+1.2
1,692,572	-				+1.5
1,692,620	+				+0.3
1,692,620	+				+0.2
1,692,620	+				-2.5
1,692,620	+				+0.4
1,692,637	+				-0.7
1,692,642	+				+0.8
1,692,642	+				-0.8
1,692,642	+				-0.1
1,692,642	+				+0.3
1,692,650	-				+1.0
1,692,650	-				-2.8
1,692,650	-				-0.1
1,692,769	+		Shew_1468	0.18	+0.6