Strain Fitness in Shewanella loihica PV-4 around Shew_1343

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,551,970	-	flgA	Shew_1342	0.40	-0.1
1,552,582	+				+0.4
1,552,660	+				-1.4
1,552,905	+		Shew_1343	0.33	+0.8
1,552,913	-		Shew_1343	0.33	+1.5
1,552,913	-		Shew_1343	0.33	+0.2
1,553,349	-		Shew_1343	0.81	+0.6
1,553,349	-		Shew_1343	0.81	+0.8
1,553,349	-		Shew_1343	0.81	+0.1
1,553,386	+		Shew_1343	0.85	-0.0
1,553,387	+		Shew_1343	0.85	+0.0
1,553,387	+		Shew_1343	0.85	+1.5
1,553,395	-		Shew_1343	0.86	+0.6
1,553,395	-		Shew_1343	0.86	-1.4
1,553,395	-		Shew_1343	0.86	+0.8
1,553,395	-		Shew_1343	0.86	+1.1
1,553,463	-				-0.3
1,553,547	+				+1.6
1,553,592	+				+1.6
1,553,592	+				-1.3
1,553,602	+				+0.8
1,553,607	+				+0.5
1,553,610	-				+0.0
1,553,612	-				-0.4
1,553,615	-				-0.4
1,553,631	-				-0.3
1,553,739	-				-2.4
1,553,794	-		Shew_1344	0.15	+0.6
1,553,870	+		Shew_1344	0.24	+0.6
1,554,032	+		Shew_1344	0.44	-0.2
1,554,283	+		Shew_1344	0.74	-0.4
1,554,519	+				+0.1