Strain Fitness in Shewanella loihica PV-4 around Shew_1080

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,243,338	+	thrA	Shew_1079	0.66	+0.5
1,243,338	+	thrA	Shew_1079	0.66	+0.6
1,243,346	-	thrA	Shew_1079	0.67	-0.4
1,243,727	+	thrA	Shew_1079	0.82	-0.1
1,243,735	-	thrA	Shew_1079	0.83	+0.1
1,243,735	-	thrA	Shew_1079	0.83	+1.0
1,244,135	+				+0.5
1,244,159	-				+0.6
1,244,415	+		Shew_1080	0.26	+0.3
1,244,689	-		Shew_1080	0.55	+0.5
1,245,327	+		Shew_1081	0.16	-0.1
1,245,386	-		Shew_1081	0.20	+0.5
1,245,518	+		Shew_1081	0.30	+0.1
1,245,564	+		Shew_1081	0.34	+0.5
1,246,027	-		Shew_1081	0.70	-0.1