Strain Fitness in Shewanella loihica PV-4 around Shew_1072

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,233,417	-		Shew_1070	0.81	+0.4
1,233,479	+		Shew_1070	0.86	+0.1
1,233,480	-		Shew_1070	0.86	+0.4
1,233,564	-				-0.3
1,233,783	+				-0.1
1,233,922	-		Shew_1071	0.13	+0.3
1,234,108	-		Shew_1071	0.69	+0.3
1,234,357	+				-2.0
1,234,371	+				-0.2
1,234,439	+				-2.7
1,234,473	-				+0.6
1,234,541	-		Shew_1072	0.13	+0.2
1,234,605	-		Shew_1072	0.16	+0.8
1,234,758	+		Shew_1072	0.24	+1.1
1,234,867	+		Shew_1072	0.29	+0.8
1,235,608	+		Shew_1072	0.67	+0.2
1,236,118	-				-1.1
1,236,201	-				+2.0
1,236,229	+				+0.1
1,236,267	-				+0.1
1,236,448	+				+0.6
1,236,448	+				+1.5
1,236,456	-				+0.4
1,236,514	+				+0.7
1,236,624	+				+1.6
1,236,624	+				+0.8
1,236,631	+				+1.4
1,236,632	-				+0.4
1,236,833	+				-0.8
1,236,891	+				+0.7
1,236,989	-				+0.5
1,237,116	+				+0.4
1,237,116	+				+0.4
1,237,224	-				-0.8