Strain Fitness in Shewanella loihica PV-4 around Shew_0989

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
1,144,045	-				+0.7
1,144,278	+				+2.2
1,144,278	+				-0.4
1,144,278	+				+0.2
1,144,343	-				+0.8
1,144,544	-				+0.5
1,144,544	+				+0.4
1,144,552	-				-0.1
1,144,552	-				+0.2
1,144,579	+				+1.1
1,144,595	+				-1.5
1,144,597	-				-0.2
1,144,653	+				-0.2
1,144,661	-				+0.2
1,144,852	+				+0.2
1,144,918	+				+0.8
1,144,923	+				-0.3
1,144,926	-				+0.2
1,144,939	-				+1.0
1,145,071	+		Shew_0989	0.15	-1.9
1,145,077	+		Shew_0989	0.15	+0.4
1,145,302	-		Shew_0989	0.33	+0.2
1,145,383	+		Shew_0989	0.39	-0.7
1,145,424	-		Shew_0989	0.42	+1.6
1,145,558	+		Shew_0989	0.52	+0.5
1,145,652	+		Shew_0989	0.60	-0.1
1,145,665	-		Shew_0989	0.61	-0.2
1,145,665	-		Shew_0989	0.61	-0.4
1,145,680	-		Shew_0989	0.62	-1.0
1,146,023	-		Shew_0989	0.88	-1.1
1,146,275	+		Shew_0990	0.17	+0.2
1,146,368	-		Shew_0990	0.36	+0.5
1,146,475	+		Shew_0990	0.59	+0.5
1,146,716	-				+1.4
1,146,909	+				-0.1
1,147,017	+				+0.8