Strain Fitness in Shewanella loihica PV-4 around Shew_0762
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
862,000 | + | Shew_0760 | 0.51 | -1.2 | |
862,008 | - | Shew_0760 | 0.52 | -0.1 | |
862,108 | + | Shew_0760 | 0.64 | +0.9 | |
862,321 | + | +1.1 | |||
862,508 | + | Shew_0761 | 0.22 | +1.0 | |
862,508 | + | Shew_0761 | 0.22 | +1.0 | |
862,508 | + | Shew_0761 | 0.22 | -0.2 | |
862,516 | - | Shew_0761 | 0.24 | +0.0 | |
862,805 | - | Shew_0761 | 0.79 | +0.8 | |
862,878 | + | +0.6 | |||
862,898 | + | -2.2 | |||
862,923 | + | -1.0 | |||
864,136 | - | Shew_0762 | 0.81 | -0.9 | |
864,212 | + | Shew_0762 | 0.86 | -1.7 | |
864,508 | - | -1.1 | |||
864,771 | + | +1.3 | |||
864,771 | + | +0.2 | |||
864,779 | - | +1.2 | |||
864,812 | + | -0.9 | |||
864,841 | + | -0.7 | |||
865,048 | + | +0.7 | |||
865,257 | + | -0.1 | |||
865,265 | - | +0.2 | |||
865,344 | - | -0.9 | |||
865,346 | + | +0.9 | |||
865,354 | - | +0.1 | |||
865,361 | + | -0.3 | |||
865,369 | - | -0.5 | |||
865,395 | - | +1.1 |
Or see this region's nucleotide sequence