Strain Fitness in Shewanella loihica PV-4 around Shew_0578

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
654,308	-		Shew_0577	0.76	+0.6
654,488	-				+0.6
654,556	-				-0.1
654,635	-				-1.7
654,881	-				-0.3
655,313	-				-1.4
655,383	-	argD	Shew_0578	0.15	-1.0
655,609	+	argD	Shew_0578	0.34	-2.0
655,697	-	argD	Shew_0578	0.41	-1.1
655,772	-	argD	Shew_0578	0.47	-0.8
656,056	+	argD	Shew_0578	0.71	-0.9
656,128	-	argD	Shew_0578	0.77	-0.3
656,284	+	argD	Shew_0578	0.89	+0.9
656,292	-				-0.4
656,292	-				-0.1
656,535	-				+0.1
656,877	+		Shew_0579	0.32	+0.7
656,885	-		Shew_0579	0.33	+0.5
657,112	-		Shew_0579	0.55	+1.0
657,233	+		Shew_0579	0.67	+0.2
657,265	+		Shew_0579	0.70	-0.6