Strain Fitness in Shewanella loihica PV-4 around Shew_0513

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
579,586	+		Shew_0512	0.54	-0.2
579,644	+		Shew_0512	0.57	+0.9
579,866	+		Shew_0512	0.68	-0.5
579,891	+		Shew_0512	0.69	-0.1
579,952	+		Shew_0512	0.72	+0.6
579,960	-		Shew_0512	0.72	+0.7
580,179	+		Shew_0512	0.82	+0.2
580,187	-		Shew_0512	0.83	-0.0
580,425	+				-0.3
580,434	+				+0.6
580,987	-		Shew_0513	0.27	+2.1
581,008	+		Shew_0513	0.28	-0.7
581,008	+		Shew_0513	0.28	-0.1
581,388	-		Shew_0513	0.51	-0.2
581,388	-		Shew_0513	0.51	-0.1
581,436	-		Shew_0513	0.54	-0.4
581,473	-		Shew_0513	0.56	-0.3
581,511	-		Shew_0513	0.58	-0.6
581,953	+		Shew_0513	0.85	+0.1
581,953	+		Shew_0513	0.85	+0.5
581,961	-		Shew_0513	0.85	+0.8
581,961	-		Shew_0513	0.85	-0.1
581,995	-		Shew_0513	0.87	-0.1
582,147	-				+0.3
582,257	-				+1.5
582,288	+				+1.1
582,296	-				+0.0
582,539	+				-0.1
582,575	-				-0.3
582,726	+		Shew_0514	0.17	+0.2